Sander lucioperca (pikeperch): 116051194
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Entry
116051194 CDS
T07345
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00900
Terpenoid backbone biosynthesis
sluc01100
Metabolic pathways
Module
sluc_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
116051194
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sluc01006
]
116051194
Enzymes [BR:
sluc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
116051194
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
116051194
2.5.1.29 geranylgeranyl diphosphate synthase
116051194
Prenyltransferases [BR:
sluc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
116051194
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
GCSF
Motif
Other DBs
NCBI-GeneID:
116051194
NCBI-ProteinID:
XP_031157304
Ensembl:
ENSSLUG00000004879
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All DBs
Position
15:complement(14336891..14353742)
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AA seq
323 aa
AA seq
DB search
MYLGELEAMDGDLEAGPERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIQ
VTEMLHNASLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLEHPEA
VRVFTRQLLELHRGQGLDIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAVGLMQLFSGWKQ
DLKPLLDTLGLFFQIRDDYANLSSREYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQ
NILRQRTENMDIKRYCVDYLEKVGSFAYTRQTLRDLEAEVYRLIGEFGGNPQLESLVKHL
SQMHREAEATAESSTEPHSNQNH
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgggcgaacttgaagcaatggatggcgacttggaagccggccctgagcgaatt
ctgctggaaccatacaagtacttgttgcaattaccaggaaagcaggtgaggacaaaacta
tcccaagcatttaaccactggctcaatgttccagaggacaaactgcaggtgatcatccag
gtgactgagatgctgcacaacgccagcttgctcatagacgacatcgaggacagctccaag
ctgcggcgaggcttccctgtggcccacagcatctatggcattccctccgttatcaactcg
gccaactacgtctacttcctggggttggagaaggtgctgaccctggagcaccctgaggct
gtccgagtgtttacccggcagctgctggagctgcaccgtggtcagggcctggacatccac
tggagggacacctacacctgtcccactgagcaggagtaccgcaacatggtgctacagaaa
actggagggctctttggtctggctgtgggcctgatgcagctcttctcaggttggaaacag
gacctgaaacccctcctggacacactgggcctcttcttccagatccgcgacgactacgcc
aacctgagctctcgtgagtacagcgagaataagagcttctgtgaggacctgactgaggga
aagttctctttccccaccattcacgccatatggtcgcgtccagagagcactcaggtgcag
aacatcctgaggcagcgcacagagaacatggacatcaaacgatactgcgtggactacctg
gagaaggtaggctcgtttgcctacacccgtcagactctgcgagacctggaggcggaggtc
taccgcctcatcggggagtttgggggaaaccctcaactggagagccttgtcaaacacctc
agccaaatgcatcgtgaggctgaagccacagcagagtccagtactgagccacactccaac
caaaaccactga
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