Sander lucioperca (pikeperch): 116051335
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Entry
116051335 CDS
T07345
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116051335 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sluc02000
]
116051335 (slc6a11b)
Transporters [BR:
sluc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116051335 (slc6a11b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
DUF4131
Motif
Other DBs
NCBI-GeneID:
116051335
NCBI-ProteinID:
XP_031157522
Ensembl:
ENSSLUG00000010566
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Position
6:complement(7089142..7115845)
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AA seq
611 aa
AA seq
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MTAEKSGPVINGKPEDGRDPEGSSSSLDHREYNERGHWNNKIEFFLSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYA
TQVIEAHLNVYYVVILAWAIFYLFNCFTTELPWAGCGHYWNTENCVDYYGENSTNITNPN
GTSPVIEFWERRVLKISDGIEHIGGMRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYAMLLVLLIRGVTLPGAYEGIKFYLYPDMSRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNSYNNNCYRDCLMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWACLFFMMLIFLGLDSQFVCVESLVTAVVDMYPETFRRGYRREL
LILGMSIASFFIGLIMCTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYL
NIEDMIGYKPVFFIKWCWMILTPGICAAIFLFFLIKYKPLKYNNVYTYPDWGYGIGWFMA
MSSMVCIPVGMIWMIWKTPGTFSERIKKLTTPSPDLIMRGKLAALSPYAANDAKLKVDGK
ISTISEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagaagagcgggcccgttataaacggtaaaccagaggatggcagagaccct
gaagggtccagctccagcctagaccacagggaatacaatgagaggggccactggaacaac
aagatcgagtttttcctgtctgtggctggagagatcatagggctgggcaacgtctggagg
tttccttacctctgctacaaaaatggaggaggtgcgttcttcgttccatatgtcatcttc
tttgtatgctgcggtatccccgtgtttttcctggagactgccctgggtcagttcaccagt
gagggaggcatcacctgctggaggaaagtctgcccactattcgagggtattggctatgca
acacaggtgattgaagctcatctaaacgtatactacgtagtgattcttgcctgggccatc
ttctacctcttcaactgcttcaccaccgagctgccatgggctggctgtgggcactactgg
aatacagagaactgtgtggactactatggagaaaattccaccaacattacaaaccccaac
ggaacctctccagtcattgagttttgggaacgtagagtactgaagatatcagatggtatt
gagcacatagggggaatgcgctgggagctagccatgtgtctggcccttgcctggttcatc
tgctacttctgcatctggaagggacccaagtcaactggcaaggttgtgtatgtgacagct
acatttccttatgccatgctgttggtcctgctgatcagaggagtgacgctgccaggagca
tacgaaggcatcaagttctacctctacccggacatgtcacgtctctctgaccctcaggtg
tgggtggatgctggaacccaaatctttttctcctatgccatctgcttggggtgtctcact
gctctaggaagttacaattcctacaacaataactgctacagggactgcctcatgctgtgt
tgtctgaacagcggcaccagctttgtagcaggtttcgctatcttctctgtgctgggcttc
atggcctatgaacaaaatgttcccatcgaggctgtggcagaatctggtcctggtcttgca
tttattgcataccccaaggctgttactatgatgcctctatcgccactttgggcctgtctc
ttcttcatgatgctcatcttccttggtctggacagtcagtttgtgtgtgtggagagttta
gtgacagctgtggtagacatgtacccagagaccttcaggagaggctaccgcagagaactg
ctgattctgggcatgtctatagcctccttcttcataggactcatcatgtgtacagaggga
gggatgtacgtcttccagttgtttgactcgtacgctgccagcgggatgtgtttgctgttt
gtggcaatatttgagtccatatgtattggctgggtgtacggtagtgacagattctaccta
aatattgaggacatgattggctacaaaccggtcttcttcatcaaatggtgctggatgatc
ctgaccccgggcatttgtgctgcaattttcctgttcttcctgattaaatacaaaccgctg
aagtacaacaatgtgtacacctaccctgactggggctatggtatcggctggttcatggcc
atgtcctcgatggtctgcatccctgtggggatgatctggatgatctggaagactcctggc
accttctctgagagaataaagaagttgacgactcccagcccggacctgataatgagagga
aagctcgctgccctcagtccttatgctgccaacgatgcaaaactaaaggttgatgggaaa
atatccaccatctcagagaaggagacgcatttctaa
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