Sander lucioperca (pikeperch): 116053016
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Entry
116053016 CDS
T07345
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
116053016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116053016
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116053016
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
116053016
NCBI-ProteinID:
XP_035859142
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All DBs
Position
7:complement(24431739..24470168)
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AA seq
1378 aa
AA seq
DB search
MFNWVVKVGPQFPEVPGTNGNAKTPAASGKSAPQKNLEENSEDSQGQAGVLGWLSNGFVS
TLPQPSGSPQPSRANSETRSGEDGERSGVIGWVTHGLTKVLPQPEEKYKETYVEEVTEIF
DVEKMPDFDPLPHIPVVEMVSDDEGEKEEHSAFPPNVVNWIKHMVPQPVMPQPPGAGPIE
PSTKSSHSSLDKLISPPPESLSGISLDTDGKASAVVGWFVSGLGLKLPQPAIQPKDDAEG
APEVLQKASSKLKPDMVLEDVDSENEGKQNLKYHSKAGAPSPSLTPPAPTANQQQKAMQQ
TQPNSVQSQECVDANSKPEPSHEGVTKSQEDAETQTGRWTPFIENIKKEAEGVALATMEE
RLLQERMEMARMAEEVARQTAEMTIRQACEGQSIRLSLGSQELLEEEEPETELPMPQEEK
SDSDHSEVTEKEQSLAEETEEHTIKEPEPKEEAEPQRTSPSPPPSPEPVKISESDSESEP
EPEPEPEPETKTQKAKSEAEPVTQQPRKAEEGGQSTNAVNAGEKEEEPTGDGCGESSSLS
LRPAVNVEDVDSEREKGGAGGGGGRRGGRGEEQSNIPQILTTQDPKLTTLTVPVTPSVAR
QSKGDKDSGRNRRTIWTNIRTLHSQSEEDDDDEGSIPVRAWPSQSSLHSSDDKLKERPAS
SASQTSTVVNERLQELVRMFKERTEKAKEKLVDLDSSDEDSIIPSPPQGLAAQPAPGAQP
VDEGEKEARAGPSGGGGRGGGGAESGAEEEQSSRRSKVKNPRWIQACMHYRFPASIDPFT
NLMYVLWMFLVTLAWNWNAWFIPVRWAFPYQTPDNIYYWLLTDYLCDLIYILDITIFQPR
LQFIRGGDVVCDRKEMRKNYMKTKRFKFDVASIVPLELFYFKTGINPLLRLPRLLKINSF
FEFNERLEAILTKAYVYRVIRTTTYLLYCLHCNACLYYWGSDMIGIGSTKWVYNGKGNSY
IRCFYFAVKTLITIGGLPDPTSLPEMIFQLINYFVGVFAFSIMIGQMRDVVGAATAGQTY
YRTCVDNTIKYMSSYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLTQLPDKMRLDIAVDV
NYSIVSKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVRVVGG
PDGKTVFVTLRAGSVFGEISLLAVGGGNRRTANVIAHGFANLFILDKKDLNEILVHYPES
KKLLRKKARKMLTKGKKPEPKEEAKDPPKVPAARVRPETPKLLRAALEMTEKSSGLKGAL
AKVKEKTSKSSVSLQPSISSTLPPPSPTSSGPDRDVDTPSSISGSPATFRSASRCRNNNN
NNNDNFVMPQSVSQGHSDAGDSDAGDSDAGEMLALDQREEGVNEVEGNEGGKREEKKL
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtgggcccccaattccctgaagttcccgggacaaatggc
aatgctaagacccctgctgcctctgggaagagtgctccacagaaaaacctggaggagaat
tcagaggacagccagggccaggctggagtgttaggctggctgtctaatgggtttgtcagc
accctgcctcaaccgtctggctcccctcaacccagcagggccaactctgaaaccaggtca
ggagaggatggagaaaggtctggagtgattggctgggtcactcatggtctgaccaaggtg
ttgcctcagcctgaggagaagtacaaagagacttacgttgaggaagtaactgagatcttt
gatgtggaaaaaatgccagattttgatccccttccacacatcccggtggtggagatggtg
tcagatgatgagggggagaaagaagagcattctgcattccctcccaatgtggtgaactgg
ataaagcatatggtccctcagccagttatgccgcagccccctggtgccggacccatagaa
ccatcaaccaagtcctcccactcctctctggacaaacttatttctccaccacctgaatct
ctcagtggaatctcactggatactgacggcaaggcctcggctgtggttggctggttcgtg
tcaggactgggcctgaagctgcctcagcctgccattcaacccaaagatgatgctgagggt
gcacctgaagttctacagaaagcttcatccaaactcaaacctgacatggtactagaagac
gtggactcagaaaacgagggcaagcagaaccttaaatatcactccaaagctggagcacca
tccccatcgctgactccaccagcaccgacagcaaaccaacagcagaaagcgatgcagcag
acacagcccaattcagtgcagtctcaggagtgtgttgacgccaactcaaagccagagcca
tcacatgagggtgtgacaaaatctcaagaagatgctgagacccagacaggccgctggacg
ccattcattgaaaacatcaagaaggaggctgaaggtgtagctttggctaccatggaggaa
cgtctgctgcaggagcgcatggagatggcacgtatggctgaagaggtggccagacagaca
gctgagatgaccattagacaggcctgtgagggacagtccatcagactctcactggggagt
caagaactgctggaggaagaggagcctgaaactgagctgccaatgccacaagaagagaag
agcgacagtgaccacagtgaagtcacagaaaaggaacagagccttgctgaggagactgag
gaacacaccattaaggaaccagaaccaaaggaggaagcagagccacagcggacctccccc
tctccacctccaagtcctgaaccagtgaagatctctgagtctgactctgaatctgaacca
gaaccagaaccagaaccagaaccagagaccaagacccagaaagccaaatcagaagctgag
cctgttacccagcagccgcggaaagcagaggaaggcggtcaaagcaccaacgctgtcaac
gctggtgaaaaagaggaagaacctactggggacggctgcggtgagagctctagcctcagc
cttcgtccagctgtcaatgtagaggatgtcgactcagagcgtgagaagggaggggcagga
ggaggaggaggaagaagaggaggaagaggggaggaacagagcaatatcccccaaattctc
accacccaggaccccaaacttaccactctcactgtccctgtgaccccttccgtagctcgt
caaagtaaaggagataaagatagtggaaggaatcggcggactatctggacaaacattagg
acccttcactctcaaagtgaagaagatgatgacgatgaaggaagcatccctgtcagagcc
tggcccagccagtccagcctgcacagctcagatgacaaactgaaagaacgtccagcatct
tcagccagtcagaccagtacagtggtcaacgagcgtcttcaggagctggtcaggatgttt
aaagaaagaacggagaaggcgaaggagaaactcgtagaccttgacagctcagatgaagac
agcatcatcccctctcctccccagggtttagctgctcagcctgctcctggagctcagcca
gtggacgaaggagagaaggaggcacgagcaggtccatcaggaggaggcggaagaggaggg
gggggagcagagagtggggcagaggaggagcagtctagccgccgcagcaaggtgaaaaat
cctcggtggatacaagcttgtatgcactaccgcttccctgccagcatcgaccctttcacc
aacctaatgtacgtgctgtggatgtttttggttactctggcgtggaactggaatgcatgg
ttcatcccggtgcgctgggccttcccttaccagactccagacaatatttactactggctg
ctcactgactacctgtgtgacctcatttacatcctggacatcaccatcttccagccgcgt
ctgcagtttattcgtggtggggacgtagtgtgtgacagaaaagaaatgagaaagaattac
atgaaaaccaaacgcttcaaatttgatgtagccagcattgttcccctggagctcttctat
tttaaaactggcatcaaccctctgcttcgcttacccaggctgctgaagatcaactccttc
tttgagttcaacgagcgtctagaggccatcttgaccaaagcctacgtctacagggtgatc
cgcaccaccacctatcttctttactgtctccactgtaatgcctgtctatactactggggc
tctgacatgataggaataggatccaccaagtgggtgtacaatggaaagggcaacagttac
attcgctgtttctactttgcggtgaaaaccctgatcaccattggtggtctgccagatccc
accagcctgcccgaaatgatcttccaactcatcaactactttgttggagtctttgccttc
tctatcatgattggacagatgcgtgatgtggttggcgcagccacagcaggtcagacctac
taccgtacatgtgtggacaacactatcaaatacatgtcctcttatcgcatccctaaagac
gtgcagaaccgtgtcaaaacctggtacaactacacctggcaatcacagggcatgctggat
gagcaagagctgctgactcagttgccagataaaatgcgcctggacattgcagtagacgtt
aactactccattgtcagcaaagtcccactttttcagggttgtgacagacagatgatcttt
gacatgctgaaaagcctacgctctgttgtctacctgcctggtgattatgtctgcaaaaag
ggcgaggtgggtcgggagatgtacatcataaaggcgggggaggtgcgggtggttggagga
ccggatgggaagacagtgttcgtcactctcagagcagggtcagtcttcggagagatcagt
ttgcttgcagtaggtgggggtaacaggcgcacagcaaatgtcatcgcccatggatttgcc
aatctcttcatactggacaagaaagacctcaatgagatcctggtccactaccccgagtcc
aagaaactgctccgcaaaaaggccaggaagatgcttaccaagggaaagaaacctgagccc
aaagaagaggctaaggatccccctaaagtcccggcagcccgtgttaggcctgaaaccccc
aaactgctgagagcagccctggagatgactgagaaatcctctggacttaaaggagctctg
gctaaagtcaaagagaagaccagcaaatccagtgtctcattacagccctccatctcctcc
accctgcctcctccatctcccacctccagcggccctgacagagacgtggacacaccgtca
tccatctctggcagccctgcaacgtttcgctctgcttcccgttgccgtaacaacaacaac
aacaacaatgacaactttgtgatgcctcagtctgtatcacagggccacagtgacgcagga
gacagtgacgcaggagacagtgacgcaggagaaatgctcgccttggaccaaagagaggag
ggtgttaatgaggttgaagggaacgagggtggaaagagggaggaaaagaagttgtga
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