Sander lucioperca (pikeperch): 116053864
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Entry
116053864 CDS
T07345
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116053864 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116053864 (ttc37)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
116053864 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_19
TPR_11
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_12
HAT_Syf1_CNRKL1_N
ANAPC3
TPR_7
TPR_15
PknG_TPR
YceG_bac
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
116053864
NCBI-ProteinID:
XP_031160893
Ensembl:
ENSSLUG00000009430
LinkDB
All DBs
Position
2:complement(36164319..36184531)
Genome browser
AA seq
1569 aa
AA seq
DB search
MSNKEVKAALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQSQ
TAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKVELPNIYQKLVELYASSDKNKCYEMIS
KLSEIYQSEKEYLKLAKVWLQLIQVKEEEAVDKKELLQLWQQMTQLLSDCINEEEQDNNE
TQQHLITAFEKAMVLMDPVPGEEHKKLSADYVKCLSKLPQEEAKLKQACESMLTLYPNQS
YPLEVLCSYYLKTGVQDEDAVGCFSRLLDLAPNSGLGHLGLGTKALQEGRFKDATKDLAQ
GLKKMSSSTGWCSLAEAQFKMQRYSDSAMSCSQGLTVCVSGDKELRVKLLRLKLEALVRS
GGEAAADQALETLSQIPDAEKDPVLVALRGRAYLNRGQVDEALKVSSELVASNPSLAQGL
VLRGLAQLAQGQQQLAEESFLKAASQSPDCGEYYFLLGKLYWDMGEETRKDRSKAHTHLL
KAAKFDPHLGCVFRYLGHYYREVANDHGRARGCYKKAFEMDDDDAESGAASVDLSMEQDD
MDTALAILQSVIEKATPGSAKWAWMRRGLYYLKVGEHQQAVADLQAALRADPEDWVCWEC
LGEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQD
YVPALKGLGECQLSLAKGLMEDCRDGGAIDLIQQAIQNLFRAVVLRPDLSCLWKLLGDAC
TAVSTVSSNRAQVLVPALLAGLDSNTQSHALNQAQTLKVGERCYVRALKLMSEVPSLWYD
LGLNYYRQSSVPRPDEGGQDSQSLLLEKAQQCLKKAIMMDSGTHSYWNALGVISMSKGLE
NFALAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQ
ALIAERVGSYDTMDLFRHTTELSTHMEGVKGYAFWVCSTLLDKSNRDSELYRYNIVQMNA
ISAAQVALSKYTERIQSDPDAFIMLGYMNEHLQLKRQALQAYKRAVELLQSMSSTEQLAF
ALCSYGRALCTSGQSEEAVRVYNSIPLQEVSDLAGLALAYCRAGLIPESINAYERALAVA
SIEKEKAYILTAVALLQHRQGNLDSAKTLLFKCSMLKEPIAESLLCLCALGLVHSDATLA
AAALTELLKQGSASGKVTEQRCLLTCALLALQGNYSAVQREASRAVHSNPGNPSLWALLS
RLIPQYYPRKANGGAMAGHVACLSSMTQGKRALLYSGVNQLASGRHSEENSHRNALKTMQ
RAVLLCPDDPATWAGLMAACHTENTSCYLSGSAPCRRGLEQTLMSVVSEKVHNVEEIERP
LAQTLEAWVLQQAVTGLTLGGQLEQAEALCTQVLNVSPEHPTVMLSLRQVQCQRLLLAGG
GTALPDSVLEQLNNTVMMNPTNLGAWHWLAEVYRSQGLLVQAVLAYRQSLQLASQLGLHS
SQVASLLRLALLALEPCLAGVPRKDWTDMILEATTEVLKLGSSPMALLFQALLQYVTKMA
ARETRRLLERLVYSQDFPVTVVQVASWYLLRHLHAKNDQELMNVLLQHAKMNGDQRLLEF
HSLLASSST
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtgaaagcagcactgaagagtgccagagaggccatcaaaaacaaa
gagttcaaagaggctctaaaacactgcaaggctgttttgaaacttgagaagaacaattat
aatgcatgggtattcatcggcttggcagccagtgaactcgagcaaccagatcagtcacag
acagcctataaaaaagctgtggagctggagcctgagcagcttctggcatggcagggcttg
gcgaatctttatgaaaagactgatcagtgggatttcaaagttgagctacctaatatctac
cagaagcttgttgagctgtatgcaagctccgacaaaaataaatgttatgagatgatcagt
aagctgtcagaaatctatcagtctgaaaaagaatatttaaagttggcaaaggtttggctg
cagctcattcaggtgaaggaggaagaggctgtggataagaaagagctactgcagctatgg
caacagatgacacaactcctctcagactgcattaatgaggaagagcaggacaacaatgaa
actcagcagcatttaatcacagcatttgaaaaggccatggttctcatggatcctgtacca
ggagaggaacacaagaagctctcagctgactatgtcaaatgcctttctaaactgccacaa
gaggaagccaaactgaaacaggcatgtgagtccatgctgaccctctaccccaaccaaagt
tatcctcttgaagtcctttgctcttactacctcaaaacaggtgttcaggatgaggatgca
gtcggctgtttctcccggctcctggatctggccccgaacagcggattaggtcacttgggt
ctgggcaccaaagcactgcaagaaggaaggtttaaagatgccactaaggaccttgcacaa
gggttgaagaaaatgagctccagcacaggatggtgcagtctggctgaagctcagtttaaa
atgcagagatactcagacagtgcgatgtcatgctcccaaggtctgacagtgtgtgtttcc
ggagacaaggagctgagggtcaaactgctgaggctgaagctagaggctttagtcaggagt
ggaggagaagcggctgcggaccaggctttggagacattatcacagatcccagatgctgaa
aaagacccagttctagtagccctgagaggacgtgcataccttaacaggggacaagttgat
gaagcacttaaggtatcatcagagctggtggcctctaacccgagcctggcccagggcttg
gtactgagaggactggcacagttggctcagggccagcaacagctggcagaggagagtttc
ctaaaggcggccagccagagcccagactgtggagagtattatttcttgctgggaaaactc
tactgggacatgggagaagagacccgtaaggaccggagcaaagcccatacacatttgctc
aaggctgcaaagtttgacccacaccttggttgtgtattccgctacctcggacattattac
cgggaggtggcaaatgatcatggccgggcacgaggctgctacaagaaggcctttgagatg
gacgacgatgatgcggagtctggagctgcctccgtggatctcagcatggagcaggacgac
atggacactgccttagcgatactccagtcagtgattgagaaagccactcccgggtcagcg
aaatgggcctggatgagacgagggctgtactacctgaaggttggagagcatcaacaagct
gtagctgatctgcaggcagctctgagagcagaccccgaggactgggtgtgttgggagtgt
ttaggcgaggcctacttgaaccgccggagcttcacagcagctctgaaggcctttggtaag
gcccatcagcttcaaccctcctccatctacagtgtctaccaggctgctgctattaaacag
accctgggcaagttcaaagaggcagttgcagagtacttgcagatcacagcacagcaggac
tatgttcctgctcttaaaggtcttggggagtgccagctgtctctggcaaaaggtttgatg
gaagactgccgagatgggggagccattgacctcattcagcaagccatacagaacctcttc
cgagctgtggtgctgcgtccagacctgtcctgtttgtggaagctgttgggagacgcttgc
accgcagtcagcaccgtgtcgtcaaacagagcccaggttctagtgcccgccctgctggct
ggtttagacagcaacacccagagccacgcactgaaccaggcccagacactcaaagttggt
gagaggtgttatgtccgtgctttgaagctgatgtctgaggttcccagcctttggtatgac
ctaggactcaactattaccgccagtccagcgtacccagacctgatgagggaggccaggac
tcccaatctctactcctagagaaggcccagcagtgtttaaaaaaggctattatgatggac
agtgggacccatagctactggaatgccctgggagtgatttctatgagcaaaggtcttgag
aacttcgctctggcgcagcattgcttcatcaagtccatacaagttgagccaaataatgtt
gttgcctggaccaaccttggtaccctttatttgaaaaaggacaatatagagcttgcacac
gaggccttcaagattgcccagtcgctggagccgctttatgtcaactgctggatcggacag
gcgctgatagcagagagagtgggaagctatgacaccatggatcttttcaggcacaccact
gaactcagcacacatatggagggagtgaaaggttatgccttctgggtatgttccaccctg
cttgataagagcaacagagactcggaactatatcgctataacatagtccagatgaacgcc
atctctgctgctcaggtggcactcagcaagtacacagagaggatccagtctgaccctgat
gccttcattatgcttggctacatgaatgagcatctgcagctgaagaggcaggccttacag
gcttacaaaagagctgttgaactgcttcagtccatgtcctcgacagaacaactggctttt
gctctgtgcagctacggccgtgctttgtgcacctcgggccagtcggaggaggcggtgcgt
gtttataattccattccactgcaggaggtcagtgatctggctgggctggctctggcctac
tgcagggccggactcatcccagagagcatcaatgcctatgaacgtgccttggctgtggct
tccattgagaaggaaaaggcttacatcttgaccgctgttgcgctgcttcagcaccggcag
ggtaacctagactcagccaagactctgctgtttaaatgctcgatgttaaaggagccaatt
gcagagtccctgctgtgtttatgtgccctgggattggtccacagtgatgctacgctagct
gctgctgccctgacggagcttttgaaacagggttcagcctcagggaaagttacagagcag
cggtgtctgctcacctgcgccttgctcgccctgcagggcaactacagcgcggtgcaaaga
gaggcttccagagctgtacacagcaatcctggaaacccatctctgtgggccctgttgtcc
aggctgataccacaatactaccccagaaaggcaaatggcggagcgatggctggccatgtt
gcctgtctctccagtatgacccaaggaaagagggcactgctgtacagtggagtcaaccag
ctggctagtgggagacactctgaagagaacagtcacagaaatgccctgaagactatgcag
agagctgtgctgctctgtcctgatgatccagcaacctgggcgggattgatggctgcctgt
cacacagaaaacacttcctgttatctttcaggttctgctccttgcagacggggactggag
caaaccctcatgtcagtggtttctgagaaagtgcataatgtggaagagatagagcgccct
ctagcccagactctagaagcctgggtactacaacaggcagtcactggcctcacgctgggg
ggacagctggagcaggcagaagctctctgcacacaggtgctgaatgtttctccagaacac
ccaacagtgatgctgtcactgagacaggtgcagtgtcagcgcctccttttggccggtggt
ggtactgccctcccagactccgtactggagcaactaaacaacacagtgatgatgaacccc
accaaccttggggcatggcattggctggcggaggtgtatcgtagccagggcctgctggtc
caggcagtcctggcttacaggcagagtctgcagctagcctcacagctcggcctgcacagc
agccaggtagccagcctgctgcggctagccctgctagccctagaaccctgtctggcgggg
gtcccacgaaaggactggacggacatgatactagaagccactactgaagtcttgaagctg
ggttcgtcccctatggccctccttttccaggccctgctccagtatgtgaccaagatggct
gctagggaaacaaggcgtttgttggagagactggtgtactctcaagacttcccagtgaca
gtggtgcaggttgccagctggtacctcctcagacacttgcatgccaaaaacgaccaggag
ctaatgaatgtccttttgcaacatgccaaaatgaatggagaccaaagactgctggagttt
cattcactgcttgcctcttcttcaacctga
DBGET
integrated database retrieval system
