Sander lucioperca (pikeperch): 116063577
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Entry
116063577 CDS
T07345
Name
(RefSeq) HLA class II histocompatibility antigen, DR alpha chain-like
KO
K06752
MHC class II antigen
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04145
Phagosome
sluc04514
Cell adhesion molecules
sluc04672
Intestinal immune network for IgA production
sluc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116063577
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116063577
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
116063577
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116063577
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116063577
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116063577
Exosomal proteins of epithelial cells
116063577
Exosomal proteins of breast milk
116063577
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
116063577
NCBI-ProteinID:
XP_031174434
Ensembl:
ENSSLUG00000007679
LinkDB
All DBs
Position
13:27009522..27016611
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AA seq
240 aa
AA seq
DB search
MMMKMMKMMMILVLSGLLCVSADVLHEDIYINGCSDSDGESMYALDGEEKWVADHINKRG
VEPQPSFVDHIRYPRGFYEQAVSDQQVCRGSLKILRIVIKDPLENDPPSSLMIYTREDVE
LREKNTLICYVTGFYPAPVNFYWTKNGENVTQGTSTNVPYPNKDGSFNQFSRLEFIPQLG
DIYSCTVKHLALDQPLTRIWDVEKTQPGIGPAVFCGLGLTVGLLGVATGTFFLIKGNKCS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaagatgatgaagatgatgatgatcctcgtcctctccggtctcctctgtgtc
tcagctgacgttctacatgaggacatttatatcaacggctgttcagactctgatggagag
tccatgtatgctctggatggtgaagagaagtgggttgcagaccacatcaacaagagagga
gtcgagcctcagcccagtttcgtagatcatattaggtacccaagaggattttatgaacaa
gctgtgagtgatcaacaggtctgcagagggagcctgaagatattacgtatagtcattaag
gacccactggagaacgatcctccttccagtctgatgatctacaccagagaagacgtggag
ctcagagagaagaacaccctcatctgttatgtgactggtttctatcctgctcctgtcaac
ttctactggacaaagaacggagagaacgtcacccaaggaaccagcaccaacgttccctac
cccaacaaagacggttccttcaaccagttctccagactggagttcatccctcagctggga
gacatctacagctgtacagtcaaacatctggccctggaccaaccactgaccagaatctgg
gatgtggagaagactcagcccggtattggacctgcagttttctgtggactgggtctgact
gtcggtttgctcggtgtggctactggaaccttcttcctcatcaaaggaaacaagtgcagc
tga
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integrated database retrieval system