KEGG   Sander lucioperca (pikeperch): 116063577
Entry
116063577         CDS       T07345                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DR alpha chain-like
  KO
K06752  MHC class II antigen
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc04145  Phagosome
sluc04514  Cell adhesion molecules
sluc04672  Intestinal immune network for IgA production
sluc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116063577
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116063577
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    116063577
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    116063577
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sluc04147]
    116063577
Exosome [BR:sluc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116063577
  Exosomal proteins of epithelial cells
   116063577
  Exosomal proteins of breast milk
   116063577
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2
Other DBs
NCBI-GeneID: 116063577
NCBI-ProteinID: XP_031174434
Ensembl: ENSSLUG00000007679
LinkDB
Position
13:27009522..27016611
AA seq 240 aa
MMMKMMKMMMILVLSGLLCVSADVLHEDIYINGCSDSDGESMYALDGEEKWVADHINKRG
VEPQPSFVDHIRYPRGFYEQAVSDQQVCRGSLKILRIVIKDPLENDPPSSLMIYTREDVE
LREKNTLICYVTGFYPAPVNFYWTKNGENVTQGTSTNVPYPNKDGSFNQFSRLEFIPQLG
DIYSCTVKHLALDQPLTRIWDVEKTQPGIGPAVFCGLGLTVGLLGVATGTFFLIKGNKCS
NT seq 723 nt   +upstreamnt  +downstreamnt
atgatgatgaagatgatgaagatgatgatgatcctcgtcctctccggtctcctctgtgtc
tcagctgacgttctacatgaggacatttatatcaacggctgttcagactctgatggagag
tccatgtatgctctggatggtgaagagaagtgggttgcagaccacatcaacaagagagga
gtcgagcctcagcccagtttcgtagatcatattaggtacccaagaggattttatgaacaa
gctgtgagtgatcaacaggtctgcagagggagcctgaagatattacgtatagtcattaag
gacccactggagaacgatcctccttccagtctgatgatctacaccagagaagacgtggag
ctcagagagaagaacaccctcatctgttatgtgactggtttctatcctgctcctgtcaac
ttctactggacaaagaacggagagaacgtcacccaaggaaccagcaccaacgttccctac
cccaacaaagacggttccttcaaccagttctccagactggagttcatccctcagctggga
gacatctacagctgtacagtcaaacatctggccctggaccaaccactgaccagaatctgg
gatgtggagaagactcagcccggtattggacctgcagttttctgtggactgggtctgact
gtcggtttgctcggtgtggctactggaaccttcttcctcatcaaaggaaacaagtgcagc
tga

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