Sander lucioperca (pikeperch): 116065849
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Entry
116065849 CDS
T07345
Symbol
si:dkey-28n18.9
Name
(RefSeq) sorting nexin-6
KO
K17920
sorting nexin-5/6/32
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116065849 (si:dkey-28n18.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116065849 (si:dkey-28n18.9)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
116065849 (si:dkey-28n18.9)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Macropinocytosis
Sorting nexins
116065849 (si:dkey-28n18.9)
Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116065849 (si:dkey-28n18.9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Peptidase_C10
Motif
Other DBs
NCBI-GeneID:
116065849
NCBI-ProteinID:
XP_031177339
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All DBs
Position
6:complement(31236553..31241450)
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AA seq
369 aa
AA seq
DB search
MMEEVKEVTSTLSVDRDNINVTEVLKDGDSLTFLIVSQKLSGTGEYHVARAYDDFEWLQQ
HLFSQEDVPGIQGVIFPPLPAKAQVNASAKVMKQLGFLGLGEWQPYCKALETFLRQIAAH
SILSKNKAVEIFLTSSDPPGRQRVRKNIFNRLSQAVEEKRKEGHKDVDEFFQTERDHNLV
LTGCAKTAAERFLDVVQTEQKIAVACGHFSAALHLCVEPGEDADKQAFSKACVKLSEVFD
SMKKNMTSVAENNVSTLGLGLDLESRYQEAEKEMLFRRTCKLVELESARRNAEKAKPVKK
AAMEEVKKAAETEFDHICGVAKQEIARFQGARVEMLQQTLVQWCEKQLLTAKESAEQFNQ
HMQALRGMA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaagtgaaagaagtgacatctactctgagtgtagatcgtgataacatcaat
gtcacagaggtgttgaaagatggggactcacttaccttcctaattgtatctcaaaagctg
tctgggacaggggagtaccatgtggctcgggcctatgatgattttgaatggctgcagcag
cacctgttctctcaggaggatgtgcccgggatacagggagtcatatttcctcctcttcct
gcaaaggctcaggtgaatgcatctgccaaggttatgaaacagcttggcttccttggttta
ggagagtggcagccgtactgtaaagcattggaaaccttcctccgtcagattgctgcacac
agcatactcagcaaaaacaaagctgtagagatctttctgaccagctcagaccctccaggc
agacagagagttaggaaaaacattttcaaccggctgagtcaagcagtggaagagaagagg
aaagaaggccataaggatgtggatgagttctttcaaactgaacgtgatcataaccttgtt
cttaccggctgtgccaagactgcagctgagagattcctggatgtggtgcaaactgagcaa
aaaatagcagtggcctgtggccacttctcagctgctctgcacctctgtgtggaaccaggg
gaagacgctgacaaacaggctttctctaaggcttgtgtgaaattatcagaagtctttgat
tctatgaagaaaaatatgacaagtgttgctgagaacaacgtgagcactcttgggctaggc
ctggacctggagtcacgctaccaggaggcagaaaaggagatgctcttcaggagaacctgt
aaactagtggagttagagtctgccagaaggaatgcagagaaagccaagcctgtaaagaag
gctgctatggaggaggtgaagaaagcagcggagacggagtttgatcacatttgtggagtg
gctaaacaggagattgcacggttccagggtgcacgtgtggaaatgttgcagcagactctg
gttcagtggtgtgaaaagcagctgcttacagccaaagaaagtgctgagcagttcaaccag
cacatgcaagccttaagagggatggcctag
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