Solanum lycopersicum (tomato): 101244511
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Entry
101244511 CDS
T02665
Name
(RefSeq) long chain base biosynthesis protein 1-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00600
Sphingolipid metabolism
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
101244511
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sly01007
]
101244511
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
101244511
Amino acid related enzymes [BR:
sly01007
]
Aminotransferase (transaminase)
Class II
101244511
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
101244511
NCBI-ProteinID:
XP_004245133
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Position
8:complement(54530531..54542202)
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AA seq
486 aa
AA seq
DB search
MDSTVSILANVVGATSNWVRSVFEFQFARAVIFEVNIGGHLFVEGLLLIVILFLLSQKSY
KPPKRPLTKKEIDELCEEWAPEPLIPSITDDMKREPPVLESAAGPHTIVKGKDVVNFTSA
NYLGLLGSQELLETCTTALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSY
GLSTMFSAIPAFCKKGDVVIADEGVHWGIQNGLQLSRSTIIYFKHNNMESLRNTLEKVTQ
ENKQARKLRRYIVVEAVYQNSGKIAPLDEIIKLKEKYRFRVLLDESNSIGVLGSSGRGLT
EHCKVPSDKIDIITAAMGHALATEGGFCTGNARVIEHQRLSSSGYVFSASLPPYLASATI
KAIDIVEEKPELLVKLRQNIALLTKGLSDIKSLEIVNDPLSPIIFLALKQSTGSSKGDLQ
VLEDIADHVLKEDGVFIVTSKRSTLDKCKLPIGIRLFVSAAHSEADLVKASESLKRATAS
LLPAYD
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacagtgtcaatacttgcaaatgtagtgggagctacatctaattgggtgaga
tcagtttttgaatttcaattcgcaagagctgtgatatttgaggtcaacattggaggacat
ctatttgtggaaggtcttctcctgatagtcatccttttcctactgtctcagaagagttac
aaaccacctaaaagaccattgacgaagaaggaaattgatgaattatgtgaagaatgggcc
ccagaaccacttatcccttccatcactgatgatatgaaacgtgaacctccagttttagaa
agtgctgcagggcctcatactatagttaaagggaaagacgtagttaactttacctcagca
aactaccttggattattaggaagccaagaattactagagacttgtactactgctctagag
aagtatggtgtaggttcttgtggtccccggggattctatggcacaattgatgtccacctt
gattgtgaggccagaatagcaaagtttctgggaactccagattccatactgtattcttat
ggactttctacgatgttcagtgcaattccagcattttgcaaaaagggtgatgttgttatt
gcggatgaaggtgtccactggggaattcaaaacggccttcagctctctagaagtaccatc
atatactttaagcataacaatatggagtccttacgaaatactttggagaaagttacccaa
gaaaacaagcaagctaggaagctacggcgatatattgttgttgaagcggtgtatcagaat
tctggcaaaatagctccattagatgaaatcattaagctgaaggaaaaatatcgattccgc
gtgttgttggatgagagcaattccattggtgtgcttggcagttctggtagaggtctaact
gaacattgtaaagttccgtctgacaagatagatataataactgcggcgatgggacatgca
ttggccacagaaggtgggttttgcacagggaatgctagagtgattgaacaccagcgtctc
agtagttctggttatgtcttctctgcttcactgcctccttacttagcaagtgctacaatt
aaggctattgatatcgtggaagaaaaacctgaacttcttgtcaaactgaggcaaaatatt
gctctgttgactaaaggtctgtcagatataaaaagcttagagatagtcaacgatcccctc
tcccccattatattccttgcattaaagcagtccactggttcttcaaagggtgatctacaa
gtgcttgaagatatagctgatcatgtcttgaaggaagacggtgtcttcattgtgacttca
aagagatccactcttgataaatgtaagctgccaattggaattagattatttgtctcagca
gctcattcagaagccgatctggtgaaagccagcgaatcattgaaaagagcaactgcatca
ctactgccagcttacgattga
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