Solanum lycopersicum (tomato): 101248563
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Entry
101248563 CDS
T02665
Symbol
SRP54
Name
(RefSeq) signal recognition particle 54 kDa protein 1
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03060
Protein export
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
101248563 (SRP54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sly02044
]
101248563 (SRP54)
Enzymes [BR:
sly01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
101248563 (SRP54)
Secretion system [BR:
sly02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
101248563 (SRP54)
Eukaryotic Sec-SRP protein
101248563 (SRP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
AAA_33
nSTAND3
AAA_22
Zeta_toxin
MMR_HSR1
ResIII
AAA_16
SRPRB
AAA_19
AAA_17
CLP1_P
Fe-ADH
ATP_bind_1
ATPase
MeaB
AAA_30
APS_kinase
MobB
Methyltransf_24
DO-GTPase2
DUF1846
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
101248563
NCBI-ProteinID:
NP_001316889
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All DBs
Position
3:67558434..67565832
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AA seq
496 aa
AA seq
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MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIV
NLEDLAAGHNKRRIIQQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTK
YAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFRQSV
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDL
SGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMYEQFQSMLKMGPLGQVFSMLPGFSAEM
MPQGREKESQAKFKRYMTMMDSMTDEELDSTNPKILTESRIMRIARGSGRLVHEVMEMLE
EYKRLAKIFSKMKGLKIPKKGDMSSLSRNMNAQNMSKVLPPQMLKQIGGMGGLQNLMKQM
GSAKDMMGMFGGGGGE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagcacaattaggggggagcatctcgcgtgctctccagcagatgagcaatgcc
acaatcatcgatgaaaaggtcctcaacgagtgcctcaatgagatcacccgtgctcttcta
caggccgatgttcaatttaagctagttcgtgatatgtcaacaaatatcaagaagattgtc
aatcttgaagatcttgccgctggacacaacaagcgtaggattattcaacaggctgtgtat
aatgagctctgcaagatattggatcctgggaaacctgcatttacacttaaaaaagggaaa
cctagtgttgtaatgtttgttggtttgcaagggtctggaaaaactacaacgtgtacaaaa
tatgcttaccaccaccagaaaaggggttggaagccggctctagtctgtgcagataccttc
agagctggtgctttcgatcaattgaagcagaatgctacaaaagctaaaattcctttttat
ggaagctatacagaatcagatccagtgaaaatagccgtggacggtgtagaaacatttaag
aaggaaaattgtgatctaataattgtggataccagtgggcgccacaaacaagaagcagct
ctttttgaagaaatgcgacaagtttctgaagcaacgaaaccggatctcgtgatttttgtt
atggatagtagtattggacaagctgcttttgatcaagctcaagcatttcgacaaagtgtt
gcggttggagccgtgattgttactaagatggatggccatgcaaaaggaggtggtgcccta
agtgcagttgctgcaactaaaagtccagtcatatttattggaactggtgaacacatggac
gagtttgaagtttttgatgttaaaccatttgtcagccgtcttttaggcatgggtgacttg
tctggattggtgaacaagatacaagatgtggtcccaatggatcaacagcctgagcttctt
cagaagttatcagaaggacattttaccttgaggatcatgtacgagcaatttcagagcatg
cttaaaatgggtccccttggacaggttttttcaatgcttcctggatttagtgcagagatg
atgccacaaggtcgtgaaaaggaaagtcaagcaaagtttaaaaggtatatgacaatgatg
gactccatgactgatgaagaattggacagtaccaatccaaagattttgactgaatctcgg
atcatgcgtatagctaggggatctggccgcctcgtgcatgaggtgatggagatgttggaa
gaatacaaacgacttgccaaaatattcagcaagatgaagggtcttaagattccaaagaag
ggagatatgagctccctgtcgagaaacatgaatgcacaaaacatgagcaaagtcctcccc
cctcagatgttgaagcagatcggtggaatgggtggtttgcagaacttaatgaagcaaatg
ggttccgccaaggacatgatgggtatgtttggtggtggtggtggagagtaa
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