Solanum lycopersicum (tomato): 101250531
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Entry
101250531 CDS
T02665
Name
(RefSeq) syntaxin-32
KO
K08490
syntaxin 5
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101250531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101250531
Membrane trafficking [BR:
sly04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
101250531
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
101250531
NCBI-ProteinID:
XP_004245234
UniProt:
A0A3Q7HPJ5
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Position
8:complement(58363729..58372439)
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AA seq
341 aa
AA seq
DB search
MPVKVASASLRDRTQEFQSIAERLKKSFSSVQNGSISTSTSSGSRSEEQRTTIAMQSEFN
RRASKIGFGIHQTSQKLAKLAKLAKRTSVFDDPTTEIQELTAVIKQDITALNSAVVDLQL
HSNARNESGNSDTTSHSTTVVDDLKNRLMTATKEFKEVLTMRTENMKVHENRRQMFSSST
SKEASNPFMRQRPLASRNTASTSASPPPWANDSPSSSQLFPRKQGDGDTQPLLQDQQQQQ
QQQIVPLQDSYMQSRAEALQNVESTIHELGSIFNQLATLVSQQGEVAIRIDENMDDTLTN
VEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMIFLFFVA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgaaagtagcaagtgcgtcattacgggatcggactcaggagtttcagagtata
gcggagaggttaaagaagtcattttcgtcggttcagaatgggtcgattagcaccagcacc
agcagtggttctagatcggaggaacagaggaccactattgctatgcaatcggagttcaat
cggcgagcctccaaaattggttttggaatacatcaaacttctcagaagcttgcaaagcta
gcaaagttggcaaaaaggacttccgtttttgatgatccgactacggaaatccaagagttg
actgcagtcatcaagcaagatattacagcacttaactctgctgtagtagatctccagctt
cactctaatgctcgtaatgaaagtggtaatagtgataccactagtcactcgacgactgtt
gtagatgacttgaagaacaggctgatgactgccacaaaggagttcaaagaagtactcacc
atgcggacagagaatatgaaggttcatgagaacagaagacagatgttttcttcatcgact
agcaaagaagcttcaaatccatttatgcgccaacgtccactagcttcaaggaatactgct
agtacatcagccagccctcctccttgggctaatgattcaccttcttcttctcagttattt
ccaaggaagcaaggtgatggagacacacagccattgttgcaggatcaacaacaacagcag
cagcagcagatagttccattgcaagacagctacatgcagagtagagccgaagctctacaa
aatgtcgagtctactatccatgagctgggcagcatttttaatcagcttgctactttggtt
tctcagcaaggggaggttgcaatcaggattgatgagaacatggacgacacactaacaaat
gtggaaggggcacaaggggctctgctcaagtacctcaatagcatctcgtcaaatcggtgg
ctaatgattaagatattctttgtgttgattttcttccttatgattttcctatttttcgtg
gcatag
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