Solanum lycopersicum (tomato): 101252794
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Entry
101252794 CDS
T02665
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial isoform X2
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03030
DNA replication
sly03410
Base excision repair
sly03420
Nucleotide excision repair
sly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101252794
03410 Base excision repair
101252794
03420 Nucleotide excision repair
101252794
03440 Homologous recombination
101252794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sly03032
]
101252794
03400 DNA repair and recombination proteins [BR:
sly03400
]
101252794
Enzymes [BR:
sly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101252794
DNA replication proteins [BR:
sly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
101252794
DNA repair and recombination proteins [BR:
sly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
101252794
NER (nucleotide excision repair)
GGR (global genome repair) factors
101252794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
101252794
NCBI-ProteinID:
XP_004244135
LinkDB
All DBs
Position
7:complement(66652615..66662149)
Genome browser
AA seq
1119 aa
AA seq
DB search
MAFLGLSVQSSPFKPTSYVWFSPHSFSSRTFWASSGKALHRGEDCKTRSIENASSSLAVF
GDPIKQISSHERKLFSSGLQQKIEEDSIYGWNAEIDAIKALKAKNAYNSYKKISAANCSV
SASIDRKVNDENSDVPIEVNTRMMRERVTSSYSATTCISGGSLSSKSKPPHNPNRGEKKD
VGNWREYKKHLPQLSVGINHSRNNEVTSINKVDGPNVSHYKPLSKGSNLNGQLSSKIVNA
KFEKANKLWQGNASNQIRDSVNGTDTKVVTVKAKSVILEQATIEREKNAVKSVATDFVNG
NEAKIVSDKGTGLDQITLRERLGAMYEKVHIVDNLSAAKEVVSKLTSQYKHLVHACDTEV
ANIDIKQQTPVDHGEVICFSIYSGPEADFGDGKSCIWVDVLDGGGKDLLVEFAPFFQDPS
IRKVWHNYSFDNHVIENYGFEVSGFHADTMHMARLWDSSRRILGGYSLEALTGDSHVMCD
ARLVHAERLFHDEGLFGKISMKTIFGRKKLKKDGTEGKVIMIPSVEELQRTERELWICYS
ALDSISTLMLYESLKKKLSKRIWTFDGVRKGSMYEFYEKYWRPFGEVLVQMETEGVLVDR
AYLADIEKVAKAEQLVAVNRFRNWAAKYCADAKYMNVGSDTQLRQLFFGGIQNRKNVDES
LPNEKEFKVPNVDKVIEEGKKAPTKFRKIHLHRICDPINTEIFTASGWPSVSGDALKALA
GKVSADFDIFDEVDGNAEEVPETSVDEALTTNNEALSQNPEISAYGTAYHAFGGGQKGIE
ACHAIAALCEVCSIDSLISNFILPLQGHDVSGENGRIHCSLNINTETGRLSARRPNLQNQ
PALEKDRYKIRQAFVAAEGNSLIVADYGQLELRILAHLANCKSMLGAFEAGGDFHSRTAM
NMYPHIREAVEKGQVLLEWHPQPGEDKPPVPLLKDAFGSERRKAKMLNFSIAYGKTTIGL
SRDWKVSVKEAKETVERWYSDRKEVSDWQEQRRFEAREFGCVHTLLGRARWFPSVKNATG
SVKGHIERAAINTPVQGSAADVAMCAMLEISKNARLKELGWKLLLQVHDEVILEGPEESE
EEAMAIVVHCMSNPFNGKNILRVGLSVDAKCAKNWYSAK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttgggtctttctgttcaatcttccccttttaaaccaacttcttatgtttgg
ttttctcctcattctttctcttctcgtactttttgggcttcttctggtaaagcccttcac
aggggggaagattgcaaaactcggagtatagaaaatgcatcttccagcttagcggtgttt
ggcgatcccattaaacaaatatcaagtcatgaaaggaagttattctctagtggattacaa
cagaagattgaggaagacagtatttacggatggaatgctgaaattgatgctattaaagct
cttaaagcaaaaaacgcttataatagttataaaaagatttcagcggcaaattgcagtgtt
agcgcctccatagatcggaaggtgaatgatgaaaattctgatgttccaattgaagtcaat
acgagaatgatgcgtgagcgtgttacctctagctattcagctacaacctgtatttcagga
ggcagcttatcttcaaaaagcaaaccacctcataaccctaatagaggagagaagaaagac
gttgggaactggagagagtataaaaaacatttgcctcaactatctgtaggtatcaaccat
tcaagaaacaatgaagtcacatcaataaataaggttgatggtcctaatgtatctcattac
aaaccattatcaaaaggttccaatcttaatgggcaattatcaagcaaaattgtaaacgcc
aaattcgaaaaagcaaataaactttggcagggtaatgcatctaatcaaataagagacagt
gtgaatgggactgataccaaggtggttactgtcaaagcaaaaagtgttatcctggagcaa
gcaactatcgaaagggaaaagaatgcagttaaatcggtggcaactgattttgtgaatgga
aatgaggctaagattgtcagtgataaaggaacaggtttagatcagattaccctccgtgag
aggctgggtgcaatgtatgaaaaagtgcatatagttgacaatttatctgcagccaaggaa
gttgtcagcaaacttacaagtcagtacaagcatctcgtccatgcatgtgatactgaggta
gcgaatattgatatcaagcagcaaacacctgttgatcatggagaagttatatgcttcagt
atttattctggaccagaggctgattttggtgatgggaaatcttgtatctgggtagatgtt
cttgatggaggtggcaaggacctattagtcgaatttgctccgtttttccaagacccatcc
atcagaaaggtctggcacaattatagcttcgacaaccacgtaatagaaaattatgggttt
gaagtatctggttttcatgctgacacaatgcacatggcacgactttgggattcctctagg
cgaattttgggtggttattcattagaggcactaacaggtgattctcatgtcatgtgtgat
gctagactagtccatgctgaaaggctgttccatgatgaaggtctgtttggtaaaatatct
atgaaaactatctttggtcggaaaaagctgaagaaagatggaactgagggtaaagtaatc
atgattccttctgtcgaagagttgcaaaggactgaacgagaattgtggatttgttattct
gcattagactccatcagcacattgatgctttatgagagcttgaagaaaaaactatctaaa
cggatctggacattcgatggagttcgtaaaggatctatgtatgaattttatgagaaatac
tggcgtccatttggtgaggttctagttcaaatggaaactgagggtgtgctggttgaccgt
gcctatcttgctgacattgagaaagtcgctaaagctgagcagctggttgctgtgaataga
tttcgtaactgggcagctaagtactgtgctgatgcaaagtacatgaatgttggaagtgac
acacagttgcgtcagctgttttttggtggcatccagaatagaaagaatgttgatgagagt
ctaccaaatgagaaagaattcaaagttccgaatgttgataaagtaattgaagaaggaaag
aaggctcccaccaaatttcgtaaaatccatctacataggatttgtgatcctatcaacact
gagattttcactgccagtggttggccttccgttagtggagatgctttgaaggctctcgct
ggcaaagtttctgcagactttgatatttttgatgaagtggatggcaatgctgaggaagtt
cctgaaacaagcgttgatgaagctttaactacaaataacgaagctctcagtcaaaatcca
gaaatttcagcttatggaacagcctaccacgcctttggaggtgggcagaaaggaattgag
gcatgccatgccattgcagccttatgtgaagtttgctccatagactctttaatatccaac
tttatcctccccttgcagggtcatgatgtgtctggtgagaatggacggattcattgctcc
ctgaatataaatactgaaactgggcgcttgtctgcaaggagaccaaatttacagaatcag
cctgctcttgagaaagataggtataaaattcgccaagcttttgtagctgcagaggggaat
tccttgattgtggctgactatgggcagttggaacttaggattcttgcacatcttgccaac
tgtaagagcatgttgggtgcattcgaagctggtggagacttccattcaaggactgccatg
aatatgtatcctcacatccgtgaagctgttgaaaaggggcaggtacttcttgagtggcat
cctcaacctggtgaagacaaaccaccagttcctctgctaaaggatgcttttggctctgaa
agaaggaaagcaaagatgctcaatttttcaattgcgtacggaaaaactacaattggactc
tctcgcgattggaaggtatctgtaaaggaagcaaaggaaacagttgaacgttggtatagt
gatagaaaagaagtgtcagattggcaagaacaacgcagatttgaagcacgtgagttcgga
tgtgttcacacacttctaggacgagcacgttggtttccgtcagtaaaaaatgcaaccgga
tccgttaaaggtcacatagaacgagctgctatcaatactccagtgcagggaagtgctgca
gatgtcgctatgtgcgcgatgttagagatatcaaagaatgcacgactaaaggagcttgga
tggaaattgcttttacaggttcatgatgaagttattttggaaggaccagaagaatctgag
gaagaagccatggcaatagtggttcactgcatgtccaatccttttaatgggaaaaatatt
ctcagagttggcttatctgtcgatgctaaatgtgctaaaaactggtattctgccaagtag
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integrated database retrieval system
