Solanum lycopersicum (tomato): 101252967
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Entry
101252967 CDS
T02665
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101252967
03036 Chromosome and associated proteins [BR:
sly03036
]
101252967
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
101252967
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
101252967
SLIK complex
101252967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
101252967
NCBI-ProteinID:
XP_004252878
UniProt:
A0A3Q7JYW1
LinkDB
All DBs
Position
12:67832611..67854260
Genome browser
AA seq
1707 aa
AA seq
DB search
MAFYRNYSNETVTLDDKSQGEQSMQGIHHDVGNEEVEGSLSENDDNGQLQDEVGVEVETT
AEDQVPPGRGVNLSGKWGSGFWKDCQPMGPSGRSGSGEESKSGSEYKNEEESDEVSDGRE
DQLESEDEGRQKEMGKSRSVPADEMLSDEYYEQDGDDQSDSLHYRAANPSSGYSSKLQSR
PVSASKYASRKAKASKDQEDNEYADYEDDDSEDEDDPDDPDYGSTGRGKGIKDKDDDWEG
GESDEVNSDDDEVGISDEDEEFYRKSQGKQKNRGGHSVKSTRVVRSLATSARQKRGRTSY
EEEESSEHDSENESDEDFGNKPRRVANLRLKNSGRSSAASVSGRNSEIRTSSRRSVRKVS
YAESEESEEIDESKQKKGQKEELEEEDCDSIEKVLWHQPKGMAEEAAMNNKSADPMLLSH
LYDSEPDWNEMEFLIKWKGQSHLHCQWKSFVELQNLSGFKKVLNYTKRVMEDVKYRKTVS
REEIEVNDVSKEMDLDIIKLNSQVERVIADRISKDGYGNVVPEYLVKWKGLSYAEATWEK
DVDIAFGQDAIDEYKAREAAIMVQGKSVDFQRKKSRGSLRKLEEQPEWLKGGKLRDYQLE
GLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLANWAK
EFRKWLPDMNVIVYVGARASREVCQQYEFYNDNKVGRTTKFDALLTTYEVLLKDKAVLSK
IRWNYLMVDEAHRLKNSEASLYTTLLEFDTKNKLLITGTPLQNSVEELWALLHFLDPDKF
KSKDDFVQNYKNLSSFNEMELANLHKELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQ
KQYYKWILERNFQDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDANYFGSS
KLERIILSSGKLVILDKLLDRLHETKHRVLIFSQMVRMLDILAEYLSIKGFQYQRLDGST
KSELRQQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA
HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGKLEKKETKKGSLFD
KNELSAILRFGAEELFKEEKNDEESKKRLLSMDIDEILERAEKVEEKGAEAEEGKELLSA
FKVANFCGAEDDATFWSRWIKPEATAHAEDALAPRAARNKKSYAEASPLVVTNKRKKGGD
AQERFPKRRKGDFSCTLPAIDGASAQVRGWSFGNLSKRDATRFSREVKKFGNDSQIDLIS
SEVGGAVEAAPTEAQVELFDSLIDGCREAVKGEVVDPKGPLLDFFGVPVKADELLARVEE
LQLLAKRISRYADPVSQFRALAYLKPATWSKGCGWNQKDDARLLLGIHYHGFGNWEKIRL
DEKLGLMKKIAPVELQHHETFLPRAPQLKERASQLLQMEVAAVGGKNTSLKVGRKTSNKQ
KESLPSTTASLGKGKQSKLSSSGNAKMGRGRAAKGQKKVEPLIKEEGEMSDNEEVYEQFK
EVKWMEWCEDVMVYEEKTLKRLQRLQTTSADLPKDKVLAKIRNYLQLLGRRIDQIVFEYE
NESHKQERMTVRLWNYVSTFSNLSGEKLRQIYSKLKQEQHVEGRVGPSQFNGSAPAHPTP
GFVPRGFDAAKFEAWKRRKRAEADVHSQVQPQHQRALTNGTRLPEPNLSSGILGAAPLDS
KQSGSGRPYRTHQSGLPQRPGFSSGPR
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggctttctataggaattattcgaatgaaaccgtaacgctggatgacaaaagccaaggg
gaacaaagtatgcagggaatacatcacgatgtaggaaacgaggaagtggaaggtagtctg
agtgaaaatgatgataatggtcagttacaagatgaggttggtgtagaagtggaaacaact
gcagaggatcaggtgccgcctggaagaggagttaatttgtctgggaaatggggttctggg
ttttggaaggattgtcaaccgatgggcccctcaggtaggtctggttctggtgaagagtcg
aagagtggatcagagtataagaatgaggaggaatctgatgaggtatctgatggtagggaa
gatcagttggagtcggaagatgaaggaaggcagaaagaaatggggaagagtcgaagtgtt
ccggctgatgagatgttatctgatgaatattatgaacaagatggtgatgatcagagtgac
tcattacattacagagctgcaaacccttcaagcggttatagctcaaagctgcagtcgagg
cctgtttctgccagcaagtatgcaagtcggaaggcaaaagcttcaaaagatcaggaagat
aacgagtatgctgattacgaggatgacgacagtgaggatgaagatgatccagatgatcct
gactatggtagcacaggccgtggaaagggcatcaaggacaaggatgatgactgggagggt
ggagagtctgatgaggtcaacagtgacgatgatgaggtgggcatctccgatgaagatgaa
gaattttacagaaaatcccaaggcaagcaaaagaataggggtgggcatagtgtaaaatct
accagagtagttaggtctcttgctacatctgctcgacagaaaaggggtagaacatcatat
gaagaggaagaatcatcagaacatgattctgaaaacgagagtgatgaggattttggaaat
aaacctagaagagttgcaaatctccgccttaaaaatagtggtagatcttctgctgctagt
gtatctggcaggaatagtgaaatccgaacttcgagtcgtcggtcagttcggaaggtttca
tatgcagagagtgaagaaagtgaagaaatcgatgagagcaagcaaaagaagggccaaaag
gaagaacttgaagaggaagattgtgactcaattgagaaagttttatggcatcagccaaag
ggcatggctgaagaagctgcaatgaataacaagtcagctgatcctatgttgttgagtcat
ttgtatgactctgaaccagattggaatgagatggagttcttgataaaatggaaaggccag
tctcatttgcattgtcaatggaagtcatttgttgagctacaaaatcttagtgggtttaag
aaggttttgaattacactaaaagggtcatggaggatgtgaagtataggaagactgtatcc
cgcgaggagatcgaggtaaatgacgtgagcaaggaaatggacttggatattatcaaactg
aacagtcaggttgagagagttattgcagacagaatcagcaaagatggttatggtaatgtg
gtgccagaatatttagttaaatggaaagggctgtcttatgctgaagcaacttgggagaag
gatgttgatattgcttttggtcaagatgccatcgatgagtataaggctcgtgaggctgcc
attatggtacaagggaaatcagtggatttccagcgcaaaaagagcagaggtagtttgagg
aagcttgaagagcagcctgaatggttaaagggtgggaaacttcgagattatcagcttgaa
ggcttaaattttctggttaatagttggaggaatgatactaatgttatattagctgatgaa
atgggcctcggcaaaactgttcagtctgtttcaatgctcggttttcttcagaatgctcag
caaattcatggaccatttcttgttgttgtcccattatcaactcttgccaattgggcaaaa
gaatttaggaaatggctgcctgatatgaacgttattgtctatgtcggagcacgtgcaagt
cgtgaggtctgtcaacaatacgaattctacaatgataataaagttggcaggactaccaaa
tttgatgcactgcttactacttatgaggtgctattgaaggacaaggctgtgctttcaaag
ataaggtggaactaccttatggttgatgaagcgcacaggctaaagaacagtgaggcttct
ctttatacaacacttttggagttcgacacgaagaacaagttgcttattactggtactcca
ttgcagaacagcgttgaagaactatgggccttactccactttcttgatcctgataagttc
aagagcaaggatgattttgttcagaattataagaatcttagttcatttaatgaaatggag
cttgcgaatcttcacaaggaattgaggcctcacattctcaggagggtcataaaagatgtg
gagaagtcacttcctccaaagattgaacgaatacttagggttgagatgtcaccactacag
aaacagtattacaaatggatcttggaaaggaattttcaagacttgaataaaggtgttcgt
gggaatcaggtttcacttttaaatattgtggtggagttgaagaaatgttgcaatcacccc
tttttatttgaaagtgcggaccatggttatggtggggatgcaaattattttggcagctca
aaattggaaagaattatactaagcagtggtaagcttgttatacttgacaagctgctggac
agattgcatgaaacaaagcatcgagtgttgatattttctcagatggtgaggatgctggac
atactggccgaatatttgtctatcaaaggattccaatatcagcggcttgatggtagtaca
aagtctgagttgcgccagcaggctatggaccacttcaatgcacctggtagtgaagatttc
tgttttcttctgtcgacccgagctggtggattgggtataaatcttgcaacagcagacact
gttatcatatttgattctgattggaatccccaaaatgacttgcaggcaatgagtagagct
cataggataggacaacaagaagttgtcaacatctacagatttgttacaagtaaaagtgtg
gaggaagatatcttggaacgtgctaagaagaagatggttcttgatcatttggtgattcag
aaactgaatgcagagggtaaattagagaagaaagaaaccaagaaaggaagtctctttgat
aagaatgagctctctgccatcttgaggtttggggctgaggaactatttaaggaagaaaaa
aatgacgaagaaagcaagaaaaggcttctcagtatggatattgatgaaattcttgaacgg
gctgaaaaggttgaagagaaaggagctgaggcagaggaaggaaaggagttgctgagtgct
tttaaggttgccaatttctgtggtgctgaagatgatgcaactttttggagtcgatggata
aagccagaagcaactgcacacgctgaagacgctttggctcctcgagctgctcgaaataaa
aagagttatgcagaagctagcccgctggtggttactaataaaagaaagaagggtggtgat
gctcaggaaaggttcccaaagcgtcgcaagggagattttagctgcacacttccggcaatt
gatggtgcttccgctcaagtgagaggatggtcttttgggaacttgtcaaaaagagacgcc
acacgtttttctcgtgaggtcaagaagtttgggaatgatagccaaattgacttaatatca
tcagaggttggtggggcagttgaagctgcaccaactgaagctcaagttgagctttttgac
tcattgattgatggctgtagagaagcagttaaaggtgaagttgttgatccaaagggacct
cttttagatttttttggtgttcctgtgaaggctgatgaactattggcccgtgttgaggaa
cttcaactcctagcaaagcgcatttctcgatatgcagatcctgtctcacagttccgtgct
ttggcttatctaaagcctgcaacttggtctaaaggttgtggctggaaccagaaggatgac
gccagactgcttcttggaattcattatcacggatttggcaactgggaaaagatacgatta
gatgaaaaacttggcctcatgaagaagattgctccagtggaattacaacatcatgagact
ttcttgccaagagctccacaattgaaggagagagcttctcaacttctgcaaatggaagtt
gcagctgttggtgggaagaacactagtttaaaagtgggtcgtaaaacttccaacaagcag
aaggaaagccttcccagcacaacagcatctcttggaaagggtaaacaaagtaaattaagc
tcatctggaaatgctaaaatgggtagaggcagagctgcaaaaggtcaaaaaaaggttgag
ccgttgataaaagaggaaggtgaaatgtcagataatgaagaagtttatgagcagtttaaa
gaggtgaaatggatggaatggtgtgaagatgtgatggtgtatgaggaaaagacgcttaag
cgtcttcaaagattgcagactactagtgctgatctccccaaggacaaggtgttggccaaa
atacggaactacttgcagcttcttggtcgcaggattgatcaaatagtttttgaatatgag
aacgaatcacataagcaagaaaggatgacagtccgtttatggaattatgtctcaacattt
tcaaatttgtctggcgagaagcttcgtcagatttattctaaacttaagcaggagcaacat
gtagaaggacgggtaggaccgtcgcagtttaatggttctgcacctgcgcatccaacgcca
ggttttgtacctcgaggttttgatgcagccaaatttgaagcatggaaacgaaggaaaaga
gctgaagctgatgttcattcgcaagttcagccccaacatcaaagagctttgactaatggt
acacgccttcctgaacccaacttgtcatcagggattcttggcgcagctcctttagatagc
aaacagtcaggtagtggtaggccttacagaacacatcaatctggcctgcctcagagacca
ggtttctcgtccggtcccagatag
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integrated database retrieval system
