Solanum lycopersicum (tomato): 101254930
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Entry
101254930 CDS
T02665
Name
(RefSeq) THO complex subunit 7A
KO
K13176
THO complex subunit 7
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101254930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101254930
03041 Spliceosome [BR:
sly03041
]
101254930
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101254930
Spliceosome [BR:
sly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101254930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
SAB
MscS_porin
ArsR
SPATA1_C
Motif
Other DBs
NCBI-GeneID:
101254930
NCBI-ProteinID:
XP_004228484
UniProt:
A0A3Q7ESM0
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All DBs
Position
1:3374156..3380777
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AA seq
242 aa
AA seq
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MLAKGRRVAGKGETVPANYAFGPLEDDSIIKHRLLTRTTTTRGEPPLKKLQKKFTAFALE
VEKEADNYGDCERLAKAFLQELNTFEIPLLKSKAVIDANLREKENFNDLKDEINGQILQA
QAEIEDLKRQLEESKIERKHKEECESIRKLVAMQPPRSETQKVITELEKEIAMLGAENTA
SSRTLELRKKQFALLLHVVDELQNAIEEEQRSLVEELRNAVDDHNKNGVENGSGGPEAMA
VD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgttggcaaaaggcagaagagttgctgggaagggggagacagtgcctgcaaattatgct
tttggcccgcttgaagatgattcaattattaagcatagacttctcactcgcacaacaacc
actagaggtgaacccccattgaagaaacttcagaaaaagtttactgcttttgctttggag
gtagagaaggaagctgataactatggtgattgtgaaagacttgccaaagctttcttgcaa
gagctaaatacatttgagattccgctcctaaagagcaaagcagtcatagatgcaaatctt
agagagaaggagaacttcaacgacctaaaagatgagataaatgggcaaattttacaagct
caggccgagatagaagatctcaagaggcaacttgaagaaagcaagatagagaggaagcac
aaagaagagtgtgagtctatcaggaagttggttgccatgcagcctccaagatctgaaact
cagaaggttattacagagcttgaaaaagagatagctatgttgggggcagaaaatactgct
agttcaagaacgttggagcttcgtaaaaagcaatttgcacttctattgcacgtggttgat
gagttgcagaacgcaattgaggaagaacagaggagcttggtggaagagttgaggaatgca
gttgatgatcataataagaacggggtggagaatggtagtgggggtcctgaagcaatggct
gtagattag
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