Solanum lycopersicum (tomato): 101256653
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Entry
101256653 CDS
T02665
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
101256653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
101256653
Transcription factors [BR:
sly03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
101256653
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
101256653
NCBI-ProteinID:
XP_004234277
UniProt:
A0A3Q7FG33
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Position
3:2818434..2821040
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AA seq
334 aa
AA seq
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MDGDQNLSDLFDDSECDIFGILEALEGGGGGGGNSGITSKFNDNINNQTATIATTITTTT
SDEITGLVSEEGKKRKLISQKSTGSCATLQEEETIENKISHITVERNRRKQMNEHLSVLR
TLMPCFYAKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYSEVLSPRVLPPQLVPIS
PRLLTPSPLSPRKPPLSPRMNLPISPRTPQPTSPYKPNANANKPPEPSPTTSSNSSIDSH
VNNELAANSKSAIADVEVKFSGAGANVILKTVSPRIPGQAVKIIAALEQLALEILHVSIS
TIDGTMLNSFTIKIGIECQLSAEELAHQIQQTFC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgaccaaaatttatctgatttattcgacgattccgaatgcgatatcttcggt
attttagaggctttagaaggcggtggaggtggaggtggtaatagtggtattacttcgaaa
tttaatgataatatcaacaaccagactgcaacaatcgcaaccacaatcacaaccacaacg
tctgatgaaattacgggtttggtgtcagaagaaggaaagaagaggaagttaatatctcaa
aagtccacgggttcatgcgcgactttacaagaagaggaaactatagaaaataagatttct
catataacagttgaaaggaatcgccgcaaacaaatgaatgaacatctctccgtgctacgc
actttgatgccttgtttttatgctaaacgaggtgatcaagcatcaataattggtggggtt
gttgattacataaacgagctacaacaagttctccaatccttagaagccaaaaagcaacgc
aaagtttatagtgaagttttaagtccaagagtactcccaccacaactagtcccaattagt
ccaagactattaacaccttcaccattaagtccaagaaaaccaccacttagccctagaatg
aacttaccaattagcccaagaaccccacaacccacaagcccatataaacctaatgctaat
gctaacaagccacctgaaccatctcctactacttcatctaattcttccattgatagtcat
gtcaataatgagcttgctgctaattcaaagtcagccattgctgacgttgaggtgaaattc
tccggcgccggcgccaatgtcatattgaagaccgtctctccacgtattcctggccaggct
gtcaagattattgctgctttagaacaactcgcacttgaaatactccatgttagcattagt
acaattgatggtaccatgctcaactccttcaccattaagattggaattgaatgccaacta
agtgctgaagaactggctcatcagattcagcagacattctgctaa
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