Solanum lycopersicum (tomato): 101256908
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Entry
101256908 CDS
T02665
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101256908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101256908
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101256908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_1
PAS_9
Kelch_6
PAS
PAS_3
NANM
F-box-like
PAS_4
F-box
Motif
Other DBs
NCBI-GeneID:
101256908
NCBI-ProteinID:
XP_004228739
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Position
1:578604..582362
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AA seq
641 aa
AA seq
DB search
MKKMEEEEEENMRREKRFKCIKMDEDEDEDEEGEILDYYDDDEDEDEEEFENIEVTSQPV
GFFYPLTTPSSIVVSDALDPDLPVIYVNSVFESSTGYRADEVLGRNCRFLQFRDPRAQRR
HPLVDPVVVSEIRRCLEEGVDFQGELLNFKKDGTPVVNRLRLAPIHSDDGTVTHIIGIQM
FSETKIDLNTVSYPVFRETCQSHCDESSEYSIKSGNLLHCQHREICGILQLSDEVLAHNI
LSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGADVTGVLEHMTKKLAWGRLARE
LTTLEAVCWKKLTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANP
EWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWKEVSGG
APPLPRCWHSSCTMEGSKLVVSGGCTGAGVLLSDTYLLDLTNDKPTWREIPTAWTPPSRL
GHSLSAYGKTKVLMFGGLANSANVRLRSGESYTIDLEDERPEWRQLECGAFTGVGSQNAV
VPPPRLDHVAVTMPCGRIIIFGGSIGGLHSPSQLFLLDPSEEKPLWRTLSVPGQPPKFAW
GHSTCVVGGTRVFVLGGHTGEDWVLNELYELCLASKQDSDA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatggaagaagaagaagaagagaacatgagaagagaaaagagattcaaatgc
ataaaaatggatgaagatgaagacgaagatgaagaaggagaaattctcgattactatgat
gatgatgaagatgaagatgaagaagaatttgaaaatattgaagttacttcacaaccagtt
ggatttttctatcctttaacgacgccgtcttcaatcgttgtctctgatgcattagatcct
gatcttccggttatatatgtgaactctgtgtttgaaagctctactggttatcgcgctgac
gaagtactcggtcgtaactgtcggtttttgcaatttagagatccacgcgctcaaaggcgg
catcctttggtggatcctgttgttgtttctgagatcagaagatgtcttgaagaaggtgtt
gatttccaaggggagcttctcaactttaaaaaagatggtacacctgtggtgaataggcta
agacttgcacccatacatagtgatgatggcacagtgacccatattatagggattcaaatg
ttttctgaaacaaaaattgacctgaatactgtgtcatatcccgttttcagagaaacttgc
cagtctcactgtgacgagtccagcgaatactccattaaaagcggtaatttattgcattgt
cagcaccgtgaaatatgcggtattcttcagctctctgatgaagttctagctcacaacatt
ttatctcgattgactccaagggatgttgcatccattggttctgtttgtagaaggatacgc
caattgacgaaaaatgagcatgtgagaaaaatggtctgtcaaaatgcatggggagctgat
gtcacaggtgtgctggaacatatgacaaagaagttagcttgggggcgtctagctagggag
ctaaccactcttgaagcagtttgttggaagaaactgacagttagaggtgctgtagaacct
tcacgttgcaacttcagtgcatgtgctgcagggaacaggctagtgttatttggaggggaa
ggtgttaatatgcagccaatggatgacacatttgttctcaatcttgatgctgctaatcca
gaatggcgacgtgtgagtgtcaaatcatctccaccaggacgttggggccatactctctca
tgtcttaatggttcctggttggtggtgtttggtggatgtgggagacagggattgcttaat
gacgtgtttgttcttgatttagatgctaaacagcctacatggaaagaagtatccggtgga
gctcccccccttcctaggtgttggcacagctcttgcacgatggaaggctcaaagttggtt
gtttcaggtggatgcacaggtgcgggtgtacttctcagtgacacatatttgttggatctc
accaatgacaaacctacctggagagaaattccaactgcatggactcctccatctagattg
ggacactcactctcagcttatgggaagacaaaagttctaatgtttggtggccttgccaac
agcgctaacgtgcgtttaagatcaggtgaatcatacactattgatttggaggacgaaagg
ccagaatggaggcagcttgagtgtggtgcgttcacaggagtaggaagtcaaaatgctgtg
gttcctcctcctagacttgatcacgttgctgtaaccatgccttgtggtcgtatcatcatt
ttcggaggttcaattggcggactgcactctccttcacaactctttctactcgatccttca
gaggaaaaaccattatggaggactctcagtgtacctgggcaacctccaaagtttgcttgg
ggtcatagcacatgcgtggttggaggaacaagggtctttgtcctaggaggccataccggg
gaggactgggtcctgaacgaattgtatgaattgtgcttagcgagcaagcaagattctgat
gcatga
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