Solanum lycopersicum (tomato): 101257890
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Entry
101257890 CDS
T02665
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101257890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101257890
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101257890
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
HECT type E3
101257890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
101257890
NCBI-ProteinID:
XP_010326023
UniProt:
A0A3Q7HY02
LinkDB
All DBs
Position
9:904943..917008
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AA seq
1553 aa
AA seq
DB search
MGNRGQKRTENVDELPADKRPCSSTNDRPSTSNSVIPTTMSSIHESHHGDIDTSSSSSST
SGSSEGEKDSAYGSYESDNTYRDYYRQQLMGNQSKFNGVLESLRKESEESALLAALTELC
DLLSFSPDSSMSNVMADLFSPVLVRLARYESNSEIMLLAIRAMTYLCEVHPRSSASLANH
DAVPALCQRLMAIEFLDVAEQCLQALEKISREQPIVCLQSGAIMAILRYIDFFSTSEQRK
ALLTVVNICKKLPSGCPPPLMEAVPVLCDLLLYEDRQLVESVATCLIRIVEQASHSSEML
DQLCNHRLVQQVTHLIELNGRTTVSQSVYVGLIGLLVKLAAGSIVAVKTLFERNISHILK
DILSTHDFSHGVPSTLIVDGHYNQVDEVLKLLNQLLPPISREQNIKLAADKEDFLVNNPD
LLEEFGFHLLPVLIQVVNSGMSLNALFGCLSVINKLVYFSKFDRLEFLQNTNISSFLAGV
FTRRDPHVLILALQIVDKLLEKLSHIFLDSFVKEGVLFAVDALLSLQKCSQSLFSTNGVQ
ASDETSQGSAPPTAVNCLCFASDALKSPTGPESRTCKIEKETVQSLARHIKTNYFATDSM
NSRLGITDVLQKLKTLSSQLTDLVHKFSSSIAPPQEKEDFYPVLHQIMSELNGNNAISTF
EFIESGVVKSLVNYLSNGQYLGKKVDGDVSVNQLYIIEKRFELFGRLLLDNSGPLVENST
FLALIRRLHSALCSVENFPVILSHASKLRNSYATIPYEHCTPYPCLKVQFVKGEGESSLV
DYPESVVSVDPFSLLETIEGYLWPKVSKKKSEKLNPPTLDLEEESPSRASQDVSTSQGKN
PGPMESDTTSTDSHETQVVKNNLQLFAEVETVDVEQTKSVPMDISDVNAELLKKGRLNSS
EDDSSTSLECTGCCDDENVAPKLIFYLEGQKLNHKLTLYQTLLLRQIKAENDITTNSSVW
SQVHRVTYRKFVRHKPGCPHSCKHAVHSTSSEKSTAWWQFTPSFSSMFGSEMVDLEKSSP
TYDILFLLRSLEGLNRFSIHLGSRTKLYAFAEGKTTNFGDLKVTNSDLPQNEFASTKLTE
KIELQMRSPFSVSIGGLPPWCEQLVNTCPFLFGFEARCKYFRLAAFGRQPIQPESSSHNT
ATGVSGRHQNSSVLRRKKFLVHRSRILDSARQMMDLHANQKVVIEVEYNDEVGTGLGPTL
EFFTFVSHEFQKIGLGMWRGDYLAHASMSVEEESGIIFSPFGLFPRPWSPSPHSLNGLEF
SEVLKKFVLLGQIVAKSLQDGRVLDLRLSRAFYKLLLGKELTVYDIQSFDPELGGVLLEF
QALVERKRHLESHPEGKSSLDLELNFRNTKIGDLCLDYTLPGYPDYVLSSASDAKTVDSS
NLEEYVLLVVDATLNSGILRQIGAFKSGFDQVFPIRHLQVFTEDELERLLCGECGFWNSN
ELLDHIKFDHGYTANSPPVLNLLEIMKEFDSKQQRAFLQFVTGAPRLPPGGLASLSPKLT
IVRKSCSVWVDADLPSVMTCANYLKLPPYSSKEKMKEKLLYAITEGQGSFHLS
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgggggcagaaaaggactgaaaatgttgatgaactgcctgccgataagcga
ccctgtagctcaaccaatgacaggcctagtacttccaactcagtgattcctactacaatg
agttccatacacgaaagtcaccatggtgatatagacacatcttcatcatcatcatccact
tcagggtcaagtgaaggtgaaaaggactctgcttatggatcttatgaatctgataatact
tatagggactattacaggcagcaattgatgggcaatcagagcaaattcaatggagttttg
gaaagtttgagaaaagaatctgaagaatcagcactgctggctgctcttacggaactatgt
gatttgttatcgttttctcctgatagttcgatgtcgaacgtaatggcagatttattttct
cccgttcttgttagattggctagatatgagagcaattctgaaataatgctattagcaatc
agggcaatgacttatttatgtgaagttcatccccgttcgtcggcctcgcttgccaatcat
gacgcagttcctgccctttgccaaagactaatggccattgagtttttggatgtggctgaa
cagtgtttgcaagcactagagaaaatctcgcgggagcaacctatagtgtgtttgcagtct
ggggctataatggccattttacgttacattgatttcttttcgacaagtgagcagaggaag
gcactgttgacagtcgtaaatatttgtaaaaagcttccctccggatgtcctccaccttta
atggaggcggttcccgttttgtgcgatcttcttctatatgaggatagacagcttgttgag
agcgtagcaacttgtttgattagaatagtcgagcaggcatcccattcttcagagatgctg
gaccaactgtgtaatcacaggctagttcagcaagtcactcatctcatagagttgaatgga
agaacaacagttagccaatcagtttatgttggtttaattgggttacttgtcaaactggct
gctggctctattgttgctgtcaagactctctttgaacgtaacatcagccacatattaaag
gacattttatccactcatgacttctcacatggggtgccttctactctgattgttgatggg
cattataatcaggtagatgaagttctcaagttgttaaatcaacttcttcctcccatatcc
agagagcagaatatcaaactagcagcagacaaggaagatttcctcgtcaacaatccggat
cttctggaggaatttggatttcatttacttcctgtgctgatccaggtggtcaattctggc
atgagtttaaatgcattgtttggctgtctctctgtcatcaataagttggtttatttcagc
aaatttgacaggcttgaatttcttcaaaatactaacatttcaagcttcttagcaggagtt
tttactcgcagagatcctcatgttctgatattagcccttcaaattgttgataagctatta
gagaagctctctcatattttcttggactcatttgttaaggaaggtgttctttttgctgtt
gatgcacttctttccctgcaaaaatgttcgcagtctctgttttcgaccaatggtgttcaa
gcatcagatgaaaccagccaaggatcagcaccacctactgcagtaaattgtctttgtttt
gcttctgatgctcttaagtctccaacaggaccagaatcaaggacttgcaagatagagaaa
gagactgtccaaagtcttgctaggcatataaagaccaattactttgcaacagactcaatg
aactccagattaggaataaccgatgttcttcagaagctcaagactctttcgtctcagtta
actgatctggttcacaaatttagtagcagcattgctcctcctcaagagaaagaagacttt
taccctgttttgcatcaaattatgtcagagttaaatggaaataatgccatttctacgttc
gagttcattgagagtggagttgttaagtctctagtaaattacctctccaatggccaatac
ttgggaaaaaaggtagatggtgatgtctcagtaaatcagctgtatattatagaaaagaga
tttgagctgtttggtagattacttttggataactctggcccgcttgtggagaactccact
tttctagctttgataaggagattgcatagtgcactttgctctgttgagaacttcccagtc
atcttgagtcatgcatctaagctacgaaactcatatgctacaatcccatatgagcattgt
acgccatatccttgtctgaaggtccagtttgtgaagggagagggggagtcatcacttgtt
gattatccggagagtgttgtgagcgtagatcccttttcgctgttggaaacaattgaggga
tacctgtggccaaaagtgagtaaaaagaaaagtgaaaagttgaatccacccactctggat
ttggaggaagagtcaccatctcgtgcatcacaagatgtaagcacgtctcaaggtaaaaat
ccaggacccatggaatcggacaccacttcaacagattctcatgaaacacaggttgtgaag
aataacttgcaattatttgctgaagtggaaactgtggatgtagaacaaacaaagagtgtc
ccaatggatatttcagatgttaatgcagagttattgaagaaaggaagactgaattcatct
gaagatgatagtagtacaagtttggaatgtactggatgttgtgatgatgaaaatgttgca
cctaaattgatattctacctggagggacagaagttgaaccacaagttgaccctatatcaa
actctactcctgcggcagattaaagcagagaatgacatcactactaattcaagcgtgtgg
agtcaagtacacagggtgacctacagaaaatttgtgagacataaaccaggatgtcctcac
agttgcaaacatgctgtacattctacatcatctgagaaatctacagcatggtggcagttc
accccatctttctctagcatgttcggttctgaaatggttgatcttgagaaatcaagtcca
acttatgatatcttatttcttcttagaagcttggaaggtttgaacaggttcagtattcat
cttgggtctcgaacaaaactatatgcttttgctgaaggaaagactaccaattttggtgat
cttaaggttacaaattctgatctccctcagaatgaatttgcaagcactaaattgacagaa
aaaatagaactgcaaatgaggagtcccttttctgtttccataggtggtttgccaccttgg
tgtgaacaattggttaatacatgcccctttttgtttggtttcgaagcaagatgcaagtat
ttccgccttgctgcatttggtcgacagccaattcagcctgaatcatcgtctcataataca
gctacaggtgtgagtggtaggcaccaaaacagtagtgttttacgccggaaaaaattctta
gttcatcgaagtagaattttggattctgctaggcagatgatggacctccatgccaatcag
aaggttgtcattgaggtggaatataatgatgaggttggtactggtcttggtccgacgcta
gaatttttcacctttgtcagtcatgagttccagaagattgggctagggatgtggagaggt
gattacttggctcatgccagcatgagtgtagaggaggaatctggaattattttctctcct
tttggtctgttcccccgcccatggtcaccttcaccccattcattaaatggcctagagttc
tctgaagtgctgaaaaagtttgtgcttctgggccagatagttgcaaagtctcttcaagat
ggcagggttctagatcttcggttatccagagcattttacaagcttcttcttgggaaggaa
ctcactgtgtatgacatccagtcatttgaccctgaacttggtggagttctcctagaattt
caggctcttgttgaaagaaaaagacatctggaatcacatcctgagggaaaatcatcgtta
gacctagaacttaatttccggaatacaaaaattggtgatctttgtcttgactatactctt
cctggctatccagattatgtccttagttctgcatctgatgcaaaaacggttgactcctct
aacttagaggaatatgttttacttgttgtggatgctactctgaattctggaattttaaga
caaattggagcattcaagtcgggctttgatcaggttttccccatcagacatcttcaggtt
ttcactgaagatgaattagagagactattgtgcggagagtgtggattctggaactccaat
gagcttctggatcacatcaagtttgaccatgggtacactgccaacagtcctccagtttta
aatttacttgaaattatgaaggaatttgacagcaagcaacagagagcattcctgcagttt
gtcactggtgcacctagactgcctccagggggtctggcatctcttagcccaaagttaaca
atcgttcggaagagttgcagtgtttgggtcgacgctgacctacctagtgtgatgacatgt
gcaaattatctcaagctaccaccatactcttcaaaagagaaaatgaaggaaaagctgtta
tatgccataacggaaggacaaggctcattccatctttcatag
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integrated database retrieval system