Solanum lycopersicum (tomato): 101259697
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Entry
101259697 CDS
T02665
Name
(RefSeq) vacuolar protein sorting-associated protein 60.1
KO
K12198
charged multivesicular body protein 5
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101259697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101259697
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
101259697
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
DUF1319
Prefoldin
CypI
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
101259697
NCBI-ProteinID:
XP_004249941
LinkDB
All DBs
Position
11:complement(1172690..1176207)
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AA seq
232 aa
AA seq
DB search
MRRVFGAKKQTEPPPSIQDASDRINKRGDTVEEKIKKLDVELARYKEQLKKTRPGPAQDA
VKARAMRVLKQKRMYEGQRDMLFNQTYNLDQVSFAAEGIKDAQQTMSALKSANKDLKGMM
KTVKIQDIDNLQDEMMDLMDVSNEIQESLGRSYSVPDDIDEDELLGELDALEADMDTEGE
GVPSYLQPDKEPDLDAELSLPSAPTGHGPMPAGNQAYDELGLPAVPRASIRG
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaggagagttttcggtgcgaagaaacaaacggaacctcctccttccattcaagacgca
tccgatcggattaataaaagaggtgacaccgtggaggagaaaatcaagaagcttgatgtt
gaacttgcaagatacaaggaacagctaaagaagacccggccaggtccagctcaagatgct
gtaaaagctcgagcaatgagagttttgaagcaaaaaagaatgtatgaaggccaacgtgac
atgctcttcaatcagacgtacaacctagatcaagtttcatttgcagctgagggaattaaa
gatgctcagcaaacaatgtcagctttgaagtctgcaaacaaagacttgaaaggaatgatg
aagacagtgaagattcaagatatagataacctacaagatgaaatgatggacttgatggat
gtgagcaatgaaattcaagagtctcttggtagaagctacagtgtgccagatgacattgat
gaagatgaactcctcggtgagcttgatgctctggaggccgacatggatactgaaggcgaa
ggagtcccttcgtatcttcaaccagacaaggagcccgatttggatgcagagcttagccta
ccatcagcaccaacagggcatggaccaatgccagctggtaaccaggcttatgatgaacta
ggattacctgctgttcctcgcgcatcaattcgcggttaa
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