Solanum lycopersicum (tomato): 101261770
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Entry
101261770 CDS
T02665
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101261770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101261770
03012 Translation factors [BR:
sly03012
]
101261770
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101261770
Translation factors [BR:
sly03012
]
Eukaryotic type
Release factors
101261770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
She2p
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
101261770
NCBI-ProteinID:
XP_004249948
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All DBs
Position
11:1856873..1860547
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AA seq
437 aa
AA seq
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MADGQENDKNIEIWKMKKLIKALESARGNGTSMISLIIPPGDQISRITKMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIMTEDGKEKKVTFDLTPFKPIN
ASLYLCDNKFHTGPLGELLESDEKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFSQAIELSAEILSNVKFIQEKRLIGKFFEEISQDTG
KYVFGVDDTIKALEMGAVETLVVWENLDINRYVLKNSVTNEIVIKHLNKDQEADQSNFKD
SENSAELEVQDKMPLLEWFANEYKTFGCSLEFVTNRSQEGSQFCRGFGGIGGILRYQLDM
RSFDEPSDEGEYFEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggccaagaaaatgacaagaatattgaaatatggaaaatgaaaaagttaatc
aaagcccttgaatctgcaagaggaaatggtaccagtatgatttctcttattattcctcct
ggtgatcagatatctaggattaccaagatgttggcggaagaatatggtactgcatcaaat
attaagagcagagtgaatcgtcagtctgtccttggtgcaattacgtctgcccagcagagg
cttaaactgtataataaggtacctccgaatggtttggtcctttatactggaactataatg
actgaagatgggaaggaaaagaaggtaacctttgaccttacaccttttaagcccattaat
gcgtctctatacctatgtgacaacaagtttcacacgggacctctgggtgagcttttggaa
tcagatgagaagtttggtttcatcgtcatggatggtaacggtactctttttgggacctta
agtggcaacactagggaaatccttcacaaatttactgttgaccttcccaagaagcatgga
agaggaggtcaatcagctctgcgatttgctcgtcttcgaatggagaaacgccataactat
gtgaggaagacagcagagcttgctactcagttcttcattaatccagccactagtcagcca
aatgtatctggactaatacttgctgggtcagctgatttcaagacggagctgagtcagtct
gatatgtttgatccacgtcttcaggcaaagatacttaatgtggttgatgtgtcctatggt
ggggaaaatggattcagtcaggccatcgagctatctgctgagattctctcgaatgtgaag
ttcatacaagagaagcgcttgataggaaaattctttgaggagatcagtcaagatactgga
aagtatgtatttggtgtggatgacacaataaaagctctggagatgggagctgttgaaact
cttgtcgtttgggaaaatcttgatataaaccgttatgtgctgaaaaatagtgttaccaat
gagattgtcattaagcacctaaacaaggaccaagaggctgatcaaagcaacttcaaggat
tctgaaaattcagctgaattggaggtccaggacaaaatgccgctattggagtggttcgcc
aatgagtacaaaacctttggttgttcacttgagtttgtcactaacaggtctcaagagggg
tcgcagttctgccgaggatttggtggcattgggggcatccttcgttaccagcttgacatg
cgttcgtttgatgagccatctgatgaaggggaatattttgaagattctgattaa
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