KEGG   Solanum lycopersicum (tomato): 101268064
Entry
101268064         CDS       T02665                                 
Name
(RefSeq) THO complex subunit 7A
  KO
K13176  THO complex subunit 7
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101268064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    101268064
   03041 Spliceosome [BR:sly03041]
    101268064
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101268064
Spliceosome [BR:sly03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101268064
SSDB
Motif
Pfam: THOC7 SAB MG280 YwqH-like SlyX RNA_pol_Rpb1_5 DUF4094
Other DBs
NCBI-GeneID: 101268064
NCBI-ProteinID: XP_004251244
UniProt: A0A3Q7J0N8
LinkDB
Position
11:complement(60860916..60866317)
AA seq 242 aa
MSIKSRKFAGKGESVASHYAFGPLEDDIIIKHRLLTRTTTTRGEPPLKKLQKKFTTFALE
IEKEADNYSDCERLAKAFLQELNTFEIPLLKSKAVIDANVREKENFDDLKGEINKQIVQA
QADIEDLKRQLEESKVERKHKEEGEAIRKLIAMQPPRSETQKVITELEKEIAMLEAENTA
SSRTLDLRKKQFALLLHVVDELQNTIEEEQRILVEEMKNVVDDHNKSGVEDATMGAEAMA
VD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtcgataaaaagtaggaaatttgctggaaagggggaatcagtggcatcacattatgca
tttggcccacttgaagatgatataatcattaagcatagacttctgactcggacaaccacc
accagaggtgaaccaccactgaagaaacttcagaagaagttcactacttttgctttggag
atagagaaggaagctgataactacagtgattgtgaaagactagccaaagcattcttgcaa
gagctaaatacttttgagattccgctcctaaagagcaaagcagtcatagatgcgaatgtt
agagaaaaagagaattttgacgacctgaagggtgaaatcaacaagcaaattgtacaggct
caggctgacatagaagatctcaagaggcaactcgaagaaagcaaggttgaaaggaagcac
aaagaagagggtgaggctatcaggaagttaattgctatgcagcctccaagatcagaaact
cagaaggttataacagagcttgagaaagagatagctatgttggaagcagagaatactgct
agttcgaggacattggaccttcgtaaaaagcagtttgcccttttattgcatgtggttgat
gagttgcagaacacaatagaggaagagcaaaggattttggtcgaagagatgaagaatgtt
gtcgatgatcataacaagagcggagtggaggatgctaccatgggtgctgaagcaatggct
gttgattag

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