Solanum lycopersicum (tomato): 101268064
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Entry
101268064 CDS
T02665
Name
(RefSeq) THO complex subunit 7A
KO
K13176
THO complex subunit 7
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101268064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101268064
03041 Spliceosome [BR:
sly03041
]
101268064
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101268064
Spliceosome [BR:
sly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101268064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
SAB
MG280
YwqH-like
SlyX
RNA_pol_Rpb1_5
DUF4094
Motif
Other DBs
NCBI-GeneID:
101268064
NCBI-ProteinID:
XP_004251244
UniProt:
A0A3Q7J0N8
LinkDB
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Position
11:complement(60860916..60866317)
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AA seq
242 aa
AA seq
DB search
MSIKSRKFAGKGESVASHYAFGPLEDDIIIKHRLLTRTTTTRGEPPLKKLQKKFTTFALE
IEKEADNYSDCERLAKAFLQELNTFEIPLLKSKAVIDANVREKENFDDLKGEINKQIVQA
QADIEDLKRQLEESKVERKHKEEGEAIRKLIAMQPPRSETQKVITELEKEIAMLEAENTA
SSRTLDLRKKQFALLLHVVDELQNTIEEEQRILVEEMKNVVDDHNKSGVEDATMGAEAMA
VD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataaaaagtaggaaatttgctggaaagggggaatcagtggcatcacattatgca
tttggcccacttgaagatgatataatcattaagcatagacttctgactcggacaaccacc
accagaggtgaaccaccactgaagaaacttcagaagaagttcactacttttgctttggag
atagagaaggaagctgataactacagtgattgtgaaagactagccaaagcattcttgcaa
gagctaaatacttttgagattccgctcctaaagagcaaagcagtcatagatgcgaatgtt
agagaaaaagagaattttgacgacctgaagggtgaaatcaacaagcaaattgtacaggct
caggctgacatagaagatctcaagaggcaactcgaagaaagcaaggttgaaaggaagcac
aaagaagagggtgaggctatcaggaagttaattgctatgcagcctccaagatcagaaact
cagaaggttataacagagcttgagaaagagatagctatgttggaagcagagaatactgct
agttcgaggacattggaccttcgtaaaaagcagtttgcccttttattgcatgtggttgat
gagttgcagaacacaatagaggaagagcaaaggattttggtcgaagagatgaagaatgtt
gtcgatgatcataacaagagcggagtggaggatgctaccatgggtgctgaagcaatggct
gttgattag
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