Streptomyces avermitilis: SAVERM_4185
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Entry
SAVERM_4185 CDS
T00126
Symbol
sig34
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sma
Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sma03021
]
SAVERM_4185 (sig34)
Transcription machinery [BR:
sma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAVERM_4185 (sig34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
NirdL-like_HTH
MarR
HTH_3
DUF7343
DUF134
HTH_5
Motif
Other DBs
NCBI-ProteinID:
BAC71897
UniProt:
Q82FR7
LinkDB
All DBs
Position
5134202..5135131
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AA seq
309 aa
AA seq
DB search
MSASTAPPQEGAPAPAPAPSVLPATAPAQAATPVQTPVQTPAPTQFQDTAAAPEKRRGAD
TRALTQVLFAQLKDLRPGSPEHSRVRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTI
GLINAIDRFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDL
TTAFGRSPTTAEIAERLRITEEEVLSCIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDP
ALDGVEHRDLVRHLLVQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFAR
LRSANRIEA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggccagtactgcgccaccccaggaaggtgctccggctcccgctccggccccctcc
gtcctacccgccaccgcccccgcccaggccgccacccccgttcagacccccgttcagacc
cccgctcccacccagttccaggacaccgccgccgcccccgagaagcgccgcggcgccgac
acccgcgccctcacccaggtgctcttcgcccagctcaaggacttgcgtccgggcagtccg
gaacacagccgcgtccgcggggcgctcatcgaggccaacctcccgctcgtccgctacgcg
gccgcccgcttccgcagccgcaacgagccgatggaggacgtcgtccaggtcggcaccatc
ggcctgatcaacgcgatcgaccgcttcgaccccgaccggggcgtgcagttcccgaccttc
gcgatgccgaccgtcgtgggcgagatcaagcggtacttccgcgacaacgtccgtacggtc
cacgtcccgcgccggctgcacgaactgtgggtgcaggtgaacagcgcgaccgaggacctg
acgaccgccttcgggcgctccccgaccacggccgagatcgccgagcggctgcgcatcacc
gaggaggaggtgctctcctgcatcgaggccggacgctcgtaccacgcgacctcactggag
gcggcccaggagggcgacgggctgccgggactcctcgaccggctcggctacgaggacccg
gccctcgacggggtcgagcaccgcgacctcgtacggcatctcctcgtacagctgcccgag
cgcgaacagcgcatcctcctcctgcgctactacagcaatctgacgcagtcccagatcagc
gccgaactgggtgtctcccagatgcatgtgtcaaggctgctcgcccgtagcttcgcgcga
ctgcgatccgcaaacaggatcgaggcgtaa
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