Serratia marcescens subsp. marcescens Db11: SMDB11_1966
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Entry
SMDB11_1966 CDS
T03985
Symbol
oppF
Name
(GenBank) oligopeptide ABC transporter, ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac01501
beta-Lactam resistance
smac02010
ABC transporters
smac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SMDB11_1966 (oppF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMDB11_1966 (oppF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SMDB11_1966 (oppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smac02000
]
SMDB11_1966 (oppF)
Transporters [BR:
smac02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SMDB11_1966 (oppF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
PRK
nSTAND1
RsgA_GTPase
NACHT
AAA_29
MobB
RNA_helicase
AAA_16
AAA
DUF5906
NB-ARC
AAA_13
ATP-synt_ab
Sigma54_activat
MMR_HSR1
DUF87
Motif
Other DBs
NCBI-ProteinID:
CDG12542
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All DBs
Position
complement(2079950..2080951)
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AA seq
333 aa
AA seq
DB search
MTAVTDKKVLLEVADLKVHFDIHDDKQWFWQPPKTLKAVDGVTLRLFEGETLGVVGESGC
GKSTFARAIIGLVKATSGRVAWLGKDLLGMSDADWRKTRSDIQMIFQDPLASLNPRMTIG
EIIAEPLRTYYPKMPRQEVKDKVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALIL
EPKLVICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLG
HAVELGTYDEVYHNPQHPYTKALMSAVPIPDPDKEKEKQIQLLEGELPSPINPPTGCVFR
TRCPIAGPECAKTRPLLEGSFRHAVSCLKVDPL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggtaaccgacaagaaagtgctgctcgaagtcgccgatctgaaagtgcacttc
gacattcatgacgacaaacagtggttctggcagccgccgaaaaccctgaaggcggtcgat
ggcgtcacgctgcggctgttcgagggggaaactctgggcgtggttggcgaatccggctgc
ggcaaatccaccttcgcgcgcgccatcatcggcctggtgaaggccaccagcgggcgcgtc
gcctggctgggcaaagatctgctgggcatgagcgacgccgactggcgtaaaacccgcagc
gatatccagatgatcttccaggatccgctggcttcgctcaacccgcgcatgaccatcggc
gagatcatcgccgagccgctgcgcacctactacccgaaaatgccgcgtcaggaagtgaag
gacaaggtcaaggcgatgatgctgaaggtcggcctgttgcctaacctgatcaaccgctac
ccgcacgagttctccggcggtcagtgccagcgtatcggcatcgcgcgcgcgctgatcctc
gaaccgaagctggtgatctgcgacgagccggtctccgcgctggacgtgtcgattcaggcg
caggtggtgaacctgttgcagcagctgcagcgcgagatggggctgtcattgatctttatc
gcccacgatttggcggtggtgaagcacatttccgatcgcgtgctggtgatgtacctgggc
catgcggtggagctgggcacctatgatgaggtgtaccacaacccgcagcacccttacacc
aaagcgctgatgtcggcggtgccgatcccggatccggacaaggagaaggaaaaacagatc
cagctgttggaaggggagctgccttcgccgatcaacccgccgaccggctgcgtgttccgc
acccgctgcccgatcgccgggccggagtgcgccaagacgcgtccgctgctggagggcagc
ttccgccacgcggtatcctgcctgaaggtcgatccgctgtaa
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