Serratia marcescens subsp. marcescens Db11: SMDB11_2934
Help
Entry
SMDB11_2934 CDS
T03985
Symbol
ppk
Name
(GenBank) polyphosphate kinase, component of RNA degradosome
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00190
Oxidative phosphorylation
smac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
SMDB11_2934 (ppk)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMDB11_2934 (ppk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smac03019
]
SMDB11_2934 (ppk)
Enzymes [BR:
smac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
SMDB11_2934 (ppk)
Messenger RNA biogenesis [BR:
smac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SMDB11_2934 (ppk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
CDG13499
UniProt:
A0ABC9IKZ3
LinkDB
All DBs
Position
3092408..3094471
Genome browser
AA seq
687 aa
AA seq
DB search
MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFADLKRR
ILISEEQGSAGSSRHLLKKIQAKVLKTDQEFDGLYNDLLLEMARNQIFLINERQVSENQQ
IWLRQYFKQHLRQHITPILINHDTNLVQFLKDDYTYLAVEIIRGARTDYALLEIPSDKVP
RFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVTEME
SSLLELMSSSLKQRLTAEPVRFVYQRDMPNEMVELLRGKLGISNYDSVIAGGRYHNFKDF
ISFPNVGKANLVNKPLPRLRHIWFDGFRNGFDAIREKDVLLYYPYHTFEHVLELLRQASF
DPSVLAIKINIYRVAKDSRIIESMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAG
VHVIFSAPGLKIHAKLFLISRREGDDIVRYAHIGTGNFNEKTARIYTDYSLLTADSRITN
EVRRVFNFIENPYRPVTFDNLMVSPQNSRLKLYELIDNEIANAQAGEQAGIMLKINNLVD
KGLVDRLYTASGAGVKIRLLVRGMCSLIPNLPGISDNIQVISIVDRFLEHDRVYVFDNKG
DKRVYLSSADWMTRNIDYRIEVAVSLLDPALKQRVLDILEILFSDTVKARYVDKELSNQY
VPRGNRRKVRAQVAIYEYLKALEQPGQ
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggaaaagctctacatcgaaaaagaactaagctggttatcctttaatgaacgc
gtgttgcaggaagccgcagataagagcaatcccctgattgaacgtatgcgttttctgggc
atttactccaacaacctcgacgagttctataaagtccgcttcgccgatctcaaacggcgc
atcctgatcagcgaagagcaaggctccgccggttcctcgcgccacctgctgaaaaagatc
caggccaaggtgctgaaaaccgatcaggagttcgacggcctgtacaacgatctgctgctg
gaaatggcccgcaaccagatcttcctgatcaacgaacgccaggtgtccgagaaccagcaa
atctggctgcggcaatatttcaaacaacatctgcgccagcacatcacgccgatcctgatc
aaccacgacaccaacctggtgcagttcctgaaagacgactacacctatctggcggtggag
atcatccgcggcgcccgcaccgactatgcgctgctggagatcccgtccgacaaggtgccg
cgcttcgtcaatctgccgccggaagcgccgcgccgccgtaagccgatgatcctgctggac
aacattctgcgttactgcctagacgatatcttcaagggcttcttcgactacgatgcgctc
aacgcctattcgatgaaaatgacccgcgacgcggagtacgatctggtcaccgaaatggaa
tccagcctgctggaactgatgtcctccagcctgaaacagcgcctgaccgccgagccggtg
cgctttgtttatcagcgcgacatgccgaacgaaatggtggaactgctgcgcggcaagctg
ggcatctccaactacgattcggtgatcgccggcggccgctatcacaacttcaaagatttc
atcagtttcccgaacgtcggcaaggccaatctggtcaacaagccgctgccgcgcctgcgc
cacatctggttcgacggtttccgcaacggcttcgacgccattcgtgaaaaagacgtgctg
ctctactacccgtaccacaccttcgagcacgtgctggagctgctgcgccaggcgtcgttc
gatccgagcgtgctggcgatcaaaatcaacatctaccgggtggcgaaagattcgcgcatc
atcgaatcgatgatccacgccgcgcacaacggcaagaaagtcacggtggtggtcgagctg
caggcgcgcttcgacgaagaagccaacattcactgggcgaagcgcctgaccgaggccggt
gtacacgtgatcttctccgcgccgggcctgaaaatccacgccaagctgttcctgatttca
cgccgtgaaggcgatgacattgtgcgctatgctcatatcggcaccggcaactttaacgaa
aaaaccgcgcgcatctacaccgactattcgctgttgaccgccgattcacgcatcaccaac
gaggtgcgccgggtattcaactttatcgagaacccctaccggccggtcaccttcgacaac
ctgatggtgtcgccgcagaactcgcgcctgaagctgtatgagctgatcgacaacgaaatc
gccaacgcgcaggccggggaacaggccggcattatgttgaaaataaataatctggtggat
aaagggctggtagatcggttatataccgcgtccggcgccggcgtgaagatccgcctgctg
gtgcggggcatgtgttccctgattcccaacctgccggggatcagcgacaatattcaggtg
atcagcatcgtcgatcgctttttggaacacgatcgggtttacgttttcgacaataaaggt
gacaaacgggtgtatctgtcctccgccgactggatgacccgcaacatagattaccgtatc
gaagtggcggtatcgctgctggatccggcgctgaaacagcgcgttctggacattctggag
atcctgttcagcgatacggtcaaggcccgttatgtggataaagaactgagcaaccagtac
gtgccgcgcggcaaccgccgcaaagtgcgcgcccaggtggctatttacgagtatttaaaa
gctctggaacaaccaggacagtag
DBGET
integrated database retrieval system
