Serratia marcescens subsp. marcescens Db11: SMDB11_2945
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Entry
SMDB11_2945 CDS
T03985
Symbol
sdeC
Name
(GenBank) multidrug efflux pump
KO
K07799
membrane fusion protein, multidrug efflux system
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SMDB11_2945 (sdeC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smac02000
]
SMDB11_2945 (sdeC)
Transporters [BR:
smac02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SMDB11_2945 (sdeC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
YknX_C
BSH_CzcB
HH_EMRA
CzcB_C
Biotin_lipoyl
BSH_CusB
HH_AAEA_pHBA
Beta-barrel_RND_2
HH_YBHG
BSH_YhbJ
HH_AprE
PTS_EIIA_1
BSH_LcnD
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
CDG13510
UniProt:
A0ABC9IL74
LinkDB
All DBs
Position
3107537..3108790
Genome browser
AA seq
417 aa
AA seq
DB search
MNAKPQRRSLLLRLLVAAIAIIVAVLAWRHFSAAQPTAGTTPGAHQAAGKTGAGRAAGGR
RGAPMSPVQAATATQQTVPRYLSGLGTATAANTVTVTSRVDGQLMAIHFTEGQQVKAGDL
LAEIDPRPFQVQLTQAQGQLAKDQATLANARRDLARYQQLVKTNLVSRQELDTQASLVQQ
TEGAIKADQGAVDSAKLQITYSRITAPIDGRVGLKLVDVGNYVTSGSTTGLVVITQTHPI
DVVFTLPEGNIADLLKAQKAGPVSVEAWDRTNQNKLTTGSLLSLDNQIDTATGTIKLKAR
FANEDDALFPNQFVNARLQVDTLHDAVVIPTAALQMGNEGNFVWTLGEDNKVSKHRVTAG
VQDSRQVVISAGLNAGDRVVTDGIDRLTEGMQVEVLAPSEAPAAANAKREPDVQRKS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaaaccccaacgtcgttccctgctgctgcgcctgctggttgcggcgattgcg
atcatcgtcgccgttctggcctggcgccatttcagcgccgcccaaccgaccgctgggacg
acgccgggcgcgcaccaggccgccggtaaaacgggagcgggccgcgcggcgggcggcaga
cgcggcgcgccgatgtcgccggtgcaagcggcgaccgccacgcaacagacggtgccacgc
tatctttccggcttgggcaccgccaccgccgccaataccgtgaccgtcaccagccgggtc
gatggccaactgatggcgatccactttaccgaaggccagcaggtcaaagccggcgatctg
ctggcggaaatcgatccccggccattccaggttcagttgacccaggctcaggggcagttg
gcaaaagatcaggccacgctggccaacgcccgacgcgatctggcgcgctatcagcagctg
gtgaaaaccaatctggtgtcccgtcaggagctggatacgcaggcctcgctggtgcagcaa
accgaaggcgcgatcaaggccgatcagggcgcggtcgacagcgccaaactgcagatcacc
tacagccgcatcactgcgccaatcgacggccgcgtcggcctgaaactggtcgacgtcggc
aactacgtcaccagcggcagcaccaccggtctggtggtgatcacgcagacgcacccgatc
gacgtggtgttcacgctgcccgaaggcaacatcgccgatctgctcaaggcgcaaaaagcc
gggccggtgagcgtcgaagcctgggatcgcaccaaccagaacaagctgacgaccggttcg
ctgctgagcctggacaaccagattgataccgccaccggcaccatcaagctgaaagcgcgc
ttcgccaacgaagatgacgcgctgttccccaatcagttcgtcaacgcgcggctgcaggtg
gataccctgcacgatgcggtggtgatcccgaccgctgcgctgcagatgggcaacgagggc
aacttcgtttggacgctcggcgaagacaacaaggtcagcaaacatcgggtcaccgccggc
gtgcaggacagccggcaggtggtgatcagcgccggcctcaacgccggcgatcgggtggtg
accgacggtatcgatcgcctgaccgaaggcatgcaggtggaagtgctcgcgccgagcgaa
gcgccggcggcggccaacgccaagcgcgaacctgacgttcagaggaagtcctga
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