Serratia sp. FGI94: D781_3513
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Entry
D781_3513 CDS
T02433
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
smaf
Serratia sp. FGI94
Pathway
smaf03030
DNA replication
smaf03430
Mismatch repair
smaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D781_3513
03430 Mismatch repair
D781_3513
03440 Homologous recombination
D781_3513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaf03032
]
D781_3513
03400 DNA repair and recombination proteins [BR:
smaf03400
]
D781_3513
Enzymes [BR:
smaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D781_3513
DNA replication proteins [BR:
smaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D781_3513
DNA repair and recombination proteins [BR:
smaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D781_3513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGB83723
UniProt:
L0MIJ1
LinkDB
All DBs
Position
complement(3706737..3710225)
Genome browser
AA seq
1162 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTGPLVKRAAALAMPALAITDFTNLCGLVKFYGTAHGA
GVKPIIGADFHVQSEVLGDELAELTALAANNAGYQNLTLLISRAYQRGYGAAGPIIDRDW
LIEHREGLILLSGARMGDVGKFMLRGNQAQVDQCLEFYQQYFPDSYYLELIRTGRPDEEN
YLHAAVALAAERGLPVVATNDVRFLVEDDFDAHEIRVAIHDGFTLDDPKRPRNYSVQQYM
RSEDEMCELFADIPEALINSVEIAKRCNVTIRLGEYFLPQFPTGEMTTEDFLVAKSREGL
EERLEFLYPDPEERARRRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIEHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKSGEPPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAKSIGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNSGEQGYFKDLFDLCARSDIKKLNRRILEKLIMSGAFDRLGPHRAAL
MNSLPDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEQSYANVAPWQEQVVLDGERETLG
LYLTGHPITQYLKEIERYAGGMRLKDMHPTDRGKMTTAVGLVVAARVMVTKRGNRIGICT
LDDRSGRLEVMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTARELMDISEARE
KYARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRIDARAKLRFGATWRVTP
TDRLLIDLRTLVGNEQVELEFD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttattcacctgcgcgttcacagcgattactccatgatagatggg
ctcgccaagaccggtccgttggtgaagcgggccgcggcgctggcgatgccggcgctggcc
atcaccgactttaccaacctgtgcggcctggtgaagttttacggcacggcgcacggcgcc
ggggtaaagccgatcatcggtgcggatttccacgtgcagagcgaagtgctgggcgatgag
ctggccgagctgaccgccctggcggcgaacaacgccggctatcaaaacctgacgctgttg
atttcccgcgcttaccagcgcggctacggcgcggcaggcccgattatcgatcgcgactgg
ctgatcgaacaccgcgaagggctgattctgctgtccggcgcgcgcatgggcgacgtgggc
aagtttatgctgcgcggcaatcaggcgcaggtcgatcagtgcctggagttttatcagcag
tatttccccgacagttactacctggagctgatccgcaccggacgcccggatgaggagaac
tacctgcacgcggcggtggcgctggcggccgaacgcggtctgccggtggtggctaccaac
gacgtacgcttcctggtggaagatgactttgacgcgcatgagattcgcgtcgccatccac
gacggttttaccctcgacgatcccaaacgtccgcgcaactatagcgtgcagcagtatatg
cgcagcgaagatgagatgtgcgagctgttcgccgatatccccgaggcgctgatcaacagc
gtcgaaatcgccaagcgctgtaacgtcaccattcgcctcggcgagtatttcctgccgcag
ttcccgaccggtgagatgaccacggaagacttcctggttgccaaatcgcgcgaggggctg
gaagagcgcctcgagttcctgtatccggacccggaggagcgcgcccggcggcggccggaa
tatgacgaacgtctggatatcgagctgaaagtcatcaaccagatgggcttccccggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggataacgacgtgccggtaggaccg
gggcgcggttccggcgccggctcgctggtggcctatgcgctgaaaatcaccgatctggat
ccgctggagttcgacctgctgttcgaacgtttcctgaacccggaacgcgtctcgatgccc
gacttcgacgtcgatttctgtatggaaaaacgcgaccgggtgattgagcacgtggcggac
atgtacggccgcgaggcggtatcgcagattattaccttcggcaccatggcggcgaaagcg
gttatccgcgacgtgggccgcgtgctggggcatccgtacggctttgtcgaccgcatctcc
aagctggtgccgccagacccgggcatgacgctggagaaagccttcgccgccgagccgcag
ctgccggaaatctacgaggcggacgaagaggtcaaggcgctgatcgacatggcgcgcaag
ctggaaggcgtcacccgtaacgccggtaaacacgccgggggcgtggtgatcgcgccgacc
aagattaccgacttcgcgccgctgtactgcgacgccgaagggcatcacccggtgacccag
ttcgacaagaacgacgtggaatacgccgggctggtgaagttcgacttcctggggctgcgt
accctgaccatcatcgactgggcgctggagatgatcaacgcccggcgcgccaagagcggt
gagccgccgatcgatatcgcggcgatcccgctcgacgacaagaaaagcttcgacatgctg
cagcgctcggaaaccacggcggtgttccagcttgaatcgcgcggcatgaaagacctgatc
aaacgtctgaagcccgactgcttcgaagatatgatcgcactggtggcactgttccgtccg
gggccgctgcagtctggcatggtggataactttatcgaccgtaagcacggccgtgaagag
atctcctacccggatatccagtggcagcatgagtcgctcaaaccggtgctggagccgacc
tacggcattatcctgtatcaggaacaggtaatgcagattgcccaggtgctggccggctat
acgctgggcggcgcagacatgctgcgccgtgcgatgggtaagaaaaagccggaagagatg
gcgaaacagcgctcggtgtttgaagagggcgctaagagcatcggcgtcgacggcgaactg
tcgatgaaaatctttgacctggtggaaaaattcgccggttacggctttaacaaatcccac
tccgccgcctatgcgctggtgtcttaccagacgctgtggctgaaggcgcactatccggcc
gagtttatggcggcggtaatgaccgccgatatggacaacaccgacaaggtggtcggcctg
gtggacgagtgctggcgcatggggctgaagatcttgccgccggacatcaacagcggcctg
taccacttccacgtcaacgatgacggcgagatcgtttacggcatcggcgcaattaaaggg
gtgggcgaagggccgattgaggctattattgaagcacgcaacagcggcgagcagggctat
tttaaagatctgttcgacctgtgtgcgcgttcggatatcaaaaagcttaaccggcgaatt
ctggaaaagctgattatgtccggcgctttcgaccggctggggccgcaccgtgccgcgctg
atgaactcgctgcctgacgcgttgaaggcggcggatcagcatgccaaggccgaggctatc
ggccaggtggatatgtttggcgtactggcggaagcgccggagcaggtggagcaatcctac
gccaacgtagcgccgtggcaggagcaggtggtgctggacggcgagcgggaaacgctgggg
ctgtacctgaccggccacccgataacccagtatctgaaggagatcgaacgttacgccggc
ggcatgcgtttgaaagatatgcacccgacggaccggggcaaaatgactaccgccgtcggg
ctggtggtcgccgcgcgcgttatggtcaccaagcgcggtaatcgcatcggtatttgcacc
ctggatgaccgctccggacgtctggaggtgatgttatttaccgacgcgttagaaaaatac
cagcatttgttggaaaaagaccgtatcctgattgccagtggacaggtcagctttgatgac
tttagcggtgggcttaaaatgaccgcccgcgagctaatggacatcagtgaagcccgtgaa
aaatatgcgcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttg
aaccgtctccgccagtcgttggaaccgcatcgatcggggacgattccagtgcatctgtac
tatcaacggatcgacgctcgcgccaagctgcgttttggcgcaacctggcgagtgacgccc
acggaccgcttgttgatagacttacggactttggtcggtaatgaacaggtggaactggaa
tttgactaa
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