Serratia marcescens SM39: SM39_4812
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Entry
SM39_4812 CDS
T03592
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
smar
Serratia marcescens SM39
Pathway
smar00230
Purine metabolism
smar00240
Pyrimidine metabolism
smar01100
Metabolic pathways
smar01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SM39_4812 (nrdD)
00240 Pyrimidine metabolism
SM39_4812 (nrdD)
Enzymes [BR:
smar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
SM39_4812 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_Tnp_IS91
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
BAO36726
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All DBs
Position
complement(5014276..5016414)
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AA seq
712 aa
AA seq
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MKPVVIKRDGCQVPFDEARIAQAIERAALAVGVVDADYCATVARVVAQRMEPQPRVDIHE
IQQAVENQLMAGEYKQLARAYIEYRHDRDVARELRGRLNQEIRGLVEQSNRALLNENANK
DSKVIPTQRDLLAGIVAKHYAKQHILPRDVVLAHERGEIHYHDLDYSPFFPMFNCMLIDL
KGMLTNGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPFVDESF
RKHLQVAEEWQIPDAKGYAMARTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WESRLIQRSILKNRIAGLGKNRKTAVFPKLVFAIRDGLNHQYGDPNYDIKQLALECASKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGTYEQDGELVHDGRNNIGVISLNLPRIALEAM
GDESRFWALLDQRLQLAKKALMTRIARLEGIKARVAPILYMEGACGVRLKADDNIADIFK
NGRASISLGYIGLHETINALFGGENHVYDDEALRAKAVAIVARLRAAVDAWKDETGYGFS
LYSTPSENLCDRFCRLDTADFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPL
ASGGFICYGEYPNLQHNLKALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFSCTSKGF
TCPKCGNHDSAKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQLG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccagtagtgattaagcgggacggttgccaggtaccttttgacgaagcgcgcatc
gcgcaggccatcgagcgcgccgcgctggcggtgggcgtagtcgacgccgactactgcgcc
accgtcgcccgcgtggtcgctcagcgcatggagccgcagccgcgcgtcgatatccacgag
atccagcaggcggtggaaaaccagctgatggccggcgaatacaaacagctggcgcgcgcc
tatatcgaataccgccacgatcgcgacgtggcgcgcgagctgcgcggccgcctgaaccag
gagattcgcggcctggtcgagcagagcaaccgcgcgctgctaaacgaaaacgccaacaag
gacagcaaggtgatccccacccagcgcgacctgctggcgggcatcgtcgccaaacactac
gccaagcagcacatcctgccgcgcgacgtggtgctggcccatgaacgcggcgaaattcac
taccacgatctcgactactcgccgttcttcccgatgttcaactgcatgctgatcgatctg
aaaggcatgctgaccaacggcttcaagatgggcaacgccgaaatcgagccgccgaagtcg
atctccaccgccaccgccgtgaccgcgcagatcatcgcccaggtcgccagccatatctat
ggcggcaccaccatcaaccgcatcgatgaaattctggcgccgttcgtcgacgagagcttc
cgcaaacacctgcaggtggcggaagagtggcagatcccggacgccaaaggctatgccatg
gcgcgcaccgagaaagagtgttacgacgccttccagtcgctggagtacgaggtcaacacc
ctgcacaccgccaacggccagacgccgttcgtcaccttcggcttcggcctcggcaccagc
tgggagtcgcgcctgatccagcgctcaatcctgaaaaaccgcatcgccgggctgggcaaa
aaccgcaagaccgccgtgttccccaaactggtgttcgccatccgcgacggcctcaaccac
cagtacggcgatccgaactacgacatcaagcagctggcgctggagtgcgccagcaagcgc
atgtacccggacatcctcaactacgatcaggtggtgaaggtgaccggctcgttcaaaacg
ccgatgggctgccgcagcttcctgggcacctacgagcaggacggcgagctggtgcacgac
ggccgcaacaacatcggcgtcatcagcctcaacctgccgcgcatcgcgctggaggcgatg
ggcgatgagtcgcgcttctgggcgctgttggatcagcgcctgcagctggcgaaaaaggcg
ctgatgacgcgcatcgcccggctggaaggcatcaaggcgcgggtggcgccaatcctgtac
atggaaggcgcctgcggcgtgcggctcaaggccgacgataacatcgccgatatcttcaag
aacggccgcgcttcaatttcgctgggctatatcggcctgcatgagaccatcaacgcgctg
ttcggcggcgaaaaccacgtgtatgacgacgaagcgctgcgcgccaaagcggtggcgatc
gtcgcgcgcctgcgcgccgccgtcgatgcctggaaagacgagaccggctacggcttcagc
ctctacagcacgccgagcgaaaacctgtgcgatcgcttctgccggctggacaccgccgat
ttcggcgtggtgccgggcgtcaccgacaagggctattacaccaacagcttccacctcgac
gtggagaagaaggtcaatccgtacgacaagctggatttcgaagcgccctacccgccgttg
gccagtggcggcttcatctgctacggcgaatacccgaacctgcagcacaacctgaaggcg
ctggaagacgtgtgggactacagctacagccgggtgccttactacggcaccaacacgccg
atcgacgagtgctacgaatgcggcttcaccggtgaattttcctgcaccagcaaaggcttc
acctgcccgaaatgcggcaaccacgactcggccaaggtctcggtcacccgccgggtgtgc
ggctatctcggcagccccgatgcccggccgttcaacgccggcaagcaggaagaggtgaaa
cgccgggtgaaacacctcggcaacgggcagctcggctga
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