Scophthalmus maximus (turbot): 118282864
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Entry
118282864 CDS
T09850
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118282864 (scn1laa)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118282864 (scn1laa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
Lustrin_cystein
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
118282864
NCBI-ProteinID:
XP_035460254
LinkDB
All DBs
Position
14:complement(11090274..11115268)
Genome browser
AA seq
1984 aa
AA seq
DB search
MAQLLVPPGPDSFRPFSRESLKAIEARIEEENAKKPKGEKRKRDDEDDLKPSRDLVAGKY
LPILYGDIPKGMVSTPLEDLDPSYCNQKTFVVLNKRKVIFRFNAAPALYLLSPFNLLRRI
SIKILVHSLFNVVIMCTILINCGFMTQSGLPEWAKNVEYTFTGIYTFEFLVKVLAQGFCV
GKFTFLRDPWNWLDFCVIVMAYVTEFLVLRNFSALRTFRVLRAFKAISVIPGLKTIVGAL
FQSVKRLSDVMILTVFCLSVFALIGLQLFMGHLKQKCVRNGTLYNTTESGNNFNQSAFLI
NESHYYYLPGKTDPLLCGMSTEAGQCPEGFTCLKVGKNPDYDYTSFDSFGWAFLSLFRLM
TQDYWEKLYQQTLRASGKPYMLFFVLVIFLGSFYLINLILAVVAMAYEEQSQATLKETKE
KEEKFQAMMEQLKRQQEDAQAAATAAVAETGEVGDKAGGIESSADTSKLSSKSAKERRNR
RKKRKEEEGKGAEESQCSINRTRCRFSVDANPLNYDMKCSSAHQSFLSFRGHLFSSRRNS
RTSIFSFRSQAQDADSENEFADDEKSIFEDNLSRRGSLLFPRTFDRRSSSSLSQCSFLSH
RRLPPCGIKHSSVDCNGVVSLVGGNSVPSSPVGLRLPKVTVDFVSTADNADTTDSGYRQA
SGGPNQECMYFLDGPEARQRAHSTASVITSTLEELEESRQKCPSCWYNFAQTFLIWECFP
AWLKIKRVVKLIVMDPFVDLTITICIVLNTLFMAMEHYPMTTNFSNMLTVGNQVFTSIFT
AEMVLKIIALDPYYYFQEGWNIFDGIIVSLSLMELCLENVVGMSVLRSFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGVQLFGKSYKECVCKISVDCTLPRW
HMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGTPMCITVYMMVMVIGNLVVLNLFLALLL
SSFSADNLAATEDDSEMNNLQIAIGRIHKGIAIAKSLLRSSCNSVCLRDKKKGKGDDKSL
NELHRPLGPNGVPNHTIKDFPKNANGDLTGVDKNGDKYIVSSKSDDSIMSFINNPSLTIT
VPIAVGESDFENLNTEDFSSVSSDPAGCHVIVDDDGQLSSSEGSTVHGLPDGEGRESLDF
ELEDSMYPDACFPDGCVQRFKCCQVNVDVGWWKVWWTLRKTCYRIVEHSWFESFIIFMIL
LSSGALAFEDIYSEKRKTIKIMLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAWCWLDF
VIVGVSIVSLVANAIGLSEFGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIFN
VLLVCLIFWLIFSIMGVNLFAGKYYHCFNKATGKPFLPSEVKNETECKAYDKSPARWKNV
KINFDNVAAGYLALLQVATFKGWMQIMNAAVDSPSKPGEQPEYEINLIMYLYFVVFIIFG
AFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKI
QGYIFDFTTKQAFDILIMVLIWLNMVTMMVETDDQSEKKANILNKINIVFICIFTGECLL
KMISLRQYFFTNGWNIFDFIVVILSIIGMFLSDIIEKYFVSPTLFRVIRLARIGRVLRLI
KSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSKFAYVKKEEGIDDLFNFETF
GNSMICLFQITTSAGWDGLLAPILNTDKEDCNLTMEHPGNSARGDCGNPPVGIAFFVSYI
IICFLIVVNMYIAVILENFSVATEESADPLSEDDFEMFYEVWERFDPHVSQFMEYNKLSE
FADALEPPLRIAKPNRLELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDILRAQME
ERFMASNPSKVSYEPITTTLRRKQEDISATVIQRAFRNYAKKNPASKPSDTSNDDIQKNE
TLIDNQVVVTDELKKHSSADRSELPPSTASQPSGNSVTTDEKNKYEKDKSEKEVAAKDVQ
EHDI
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgccaggcccagacagcttccgcccctttagtcgtgagtcc
ctcaaagccatcgaggcacggattgaagaggagaacgccaagaagcccaagggcgagaag
agaaaacgcgatgacgaggatgaccttaagcccagccgtgacctggtggcaggcaaatac
ctccctatcctgtatggggacattcccaaaggcatggtgtcgacaccgctggaggacctg
gacccctcctactgtaatcagaagactttcgtagtattaaacaaaagaaaggtcatcttc
cgcttcaacgccgcgcctgccttgtacctgctgagccctttcaaccttctcagaagaata
tcaattaagattttggtacactcattgttcaacgtggtgatcatgtgtaccatcctcatc
aactgtggatttatgacacagagtggactgcctgagtgggcaaagaatgtggagtacaca
tttactggcatctatacctttgaattcctcgttaaggttttagctcaagggttctgtgtc
ggaaagttcacatttctaagagatccctggaactggctggatttctgtgtcattgttatg
gcgtatgtaacagagtttctagtccttcgcaatttttcagctctgcgcacgttcagagtg
ctgagagctttcaaagccatttcagttatcccaggcctgaagaccatcgttggtgcgttg
ttccagtcagtgaagaggctttctgatgtgatgatccttacggtcttctgcttaagcgtc
tttgccctcatagggttgcaattgtttatgggccatttaaagcagaagtgtgtacggaac
ggcacattatataacacgacggagagcgggaacaacttcaaccaatcagcgttcttgatc
aatgagagtcattattattaccttccaggaaagacagatccactgctttgtggaatgagc
actgaagctgggcagtgtccagagggtttcacttgcctcaaagtgggaaagaacccagac
tatgactacaccagctttgactcatttggctgggccttcctttctctgtttaggctaatg
acacaggattattgggaaaagctttatcaacagacgttgcgggcatctgggaagccttac
atgttgttttttgtgctggtgatattcctcggttctttctacctgatcaacctgatcttg
gctgtagtggccatggcctatgaggagcagagccaggccaccctgaaggagactaaggag
aaggaggagaaatttcaggccatgatggagcagctaaaacggcagcaagaggacgctcag
gcagcagcaactgcagctgttgctgagactggggaggtcggtgacaaagctggtggcatt
gagagctcggctgacacctccaagctcagctccaaaagtgccaaagagagacgcaacagg
cgaaaaaaacgaaaggaggaggagggcaaaggggctgaggagtcgcagtgtagtataaat
aggactcgctgccgcttctccgtggatgcaaacccgctcaactacgatatgaaatgctct
tccgcacatcagtcctttctgagttttcgaggacacctgttctcatccagacggaacagc
aggaccagcattttcagtttccgaagccaagcgcaggacgcagactcagagaatgagttt
gctgatgatgagaaaagtatttttgaggataacctaagccggagaggctctttacttttc
ccccggacttttgatcggcgcagcagcagcagcttaagccagtgcagcttcttgtcacat
cgccggcttccaccctgtgggatcaagcacagttctgtagactgcaatggggtggtgtct
ctggtgggtgggaattctgtcccatcatcacctgtggggctccgtctgcctaaagtgaca
gtagatttcgtctccactgcagacaacgctgacaccactgactcggggtacagacaggcc
agtgggggaccaaaccaggagtgtatgtacttccttgatggcccagaggccagacagcga
gctcatagtacagctagtgtcataaccagcacattggaggagctggaagagtcgaggcag
aagtgtccctcttgctggtacaattttgcccaaaccttcctcatctgggaatgttttcca
gcatggctgaagatcaagagagtggttaaactaattgtaatggacccatttgtggatcta
accatcaccatctgcattgttctcaatacattgtttatggccatggaacattatccaatg
accacgaatttcagcaatatgctgactgttggcaatcaggtcttcactagcatcttcact
gctgaaatggtccttaagatcattgcattggacccatactactacttccaggaggggtgg
aatatttttgacggaatcattgtcagtttaagcttgatggagctttgtttggagaatgtg
gttggcatgtctgttctgagatcattcagattgctgagagtattcaagttggctaaatca
tggcccactcttaacacgctgatcaaaataattggtaattcagtgggggctctgggcaac
ctgaccctggtgctggccattatcgtcttcatctttgctgtggtgggcgtgcaactgttt
ggaaaaagctacaaggaatgtgtgtgtaaaatctctgtcgactgcactctgccccgttgg
cacatgagcgacttcttccattcattcctcattgtgttccgagtgctttgtggagagtgg
atagagaccatgtgggactgtatggaggtggctgggacgcccatgtgcatcactgtctac
atgatggtcatggttattggaaaccttgtggtgctgaacctgttcctggccctgctactg
agttcattcagtgccgacaacctggcagcgacagaggacgacagcgagatgaacaatctg
cagattgccattggacgtattcacaaaggcattgcgattgccaagtccctgcttcgaagc
agctgcaacagcgtctgtctcagggataagaagaaagggaagggtgatgacaaatcactg
aatgagctccacagacctctagggccgaatggtgtccccaaccacaccatcaaagacttt
cctaagaacgccaacggggacctgactggagtggacaaaaatggagacaagtacatagtc
agcagcaagagtgacgattctataatgtcttttatcaacaatcctagtctgactatcact
gttcctattgctgtgggagagtcagactttgaaaacctcaacacggaggacttcagcagt
gtctcatctgacccagcaggatgccatgtgattgtagacgatgatgggcagctcagttcc
tccgagggtagcacggtgcatggtttgcccgatggggagggaagagagtctcttgacttt
gaacttgaggattctatgtaccctgacgcttgctttcctgatggttgtgtgcaaaggttc
aagtgttgtcaggtaaatgtagacgtgggctggtggaaggtgtggtggaccctaagaaag
acctgttaccggattgtggagcacagctggtttgagagcttcatcatcttcatgatcctg
cttagcagtggagcactggcatttgaagatatctacagtgagaagaggaagactatcaaa
ataatgttggagtttgcagacaaaatcttcacctacatcttcattcttgagatgttactg
aagtgggtggcatacggatttgccaagtacttcactaatgcctggtgctggctggacttc
gtcattgttggtgtatcaatagtcagtttggtagccaatgccattggattatcagaattc
ggtgccatcaagtctctgagaacgctgcgggctttgaggcccctgagagccttgtcacgg
ttcgagggcatgcgggtcgttgtcaatgccctgctcggagccattccctccatcttcaat
gtgctgctggtatgtctcatattttggctcatcttcagcatcatgggagtcaacttattt
gcggggaagtactaccattgttttaacaaagccaccggtaagcctttccttccatcagag
gttaaaaatgagacagagtgtaaggcctatgacaagagcccggctcgctggaagaatgtc
aaaatcaactttgacaatgttgctgcgggatacctcgcactgctgcaagtggctacattc
aagggctggatgcagatcatgaatgctgctgtcgactctccaagcaagccaggagaacaa
cccgagtatgagatcaacctgattatgtacctgtattttgttgttttcatcatatttgga
gccttcttcacactcaatctctttattggtgtcatcatagacaatttcaatcagcaaaag
aaaaagtttggaggtcaagacatcttcatgaccgaagaacagaagaaatactacaatgcc
atgaaaaagctggggtcaaagaaaccacaaaaaccgattcctagaccatcaaacaagatt
caaggatacatctttgacttcaccacaaaacaagcattcgatattttaataatggttcta
atatggcttaatatggtaacgatgatggtggaaactgatgaccagtcggagaaaaaggca
aacattctcaacaaaatcaatatagtattcatttgcatcttcactggagaatgcttgttg
aagatgatttctcttcgccagtactttttcacaaacggctggaatatatttgatttcatc
gttgtcattctgtcaatcattggtatgtttctctcagacattatagagaagtatttcgtt
tcgccaaccttgttcagagtcatccggttggctcggattggccgcgtcctccgccttatt
aaaagcgccaaagggatccggacactcttgtttgccttgatgatgtcacttcctgctttg
ttcaacattggtctcctgctcttcttagtgatgtttatttatgcaatctttggcatgtca
aagtttgcctacgtcaagaaggaagagggtattgatgacctcttcaattttgagacattt
ggcaacagcatgatctgtctgttccagatcaccacctcagcagggtgggatggcctacta
gctcccattctcaacacagataaagaagattgcaatcttaccatggagcatcctggcaat
tctgctaggggagactgtgggaatcctcctgtgggaattgcgttcttcgtgagctacatc
ataatctgtttcctgattgtggtgaatatgtacattgcagtcatcctggaaaacttcagt
gtggccacagaggagagcgcggacccactaagtgaggatgattttgaaatgttttatgag
gtctgggaaaggtttgatcctcatgtatcacagttcatggagtacaataagctgtcagaa
ttcgcagatgctttggagccaccgttacgcatagccaagcctaacaggctcgaactgatc
tccatggatcttcccatggtgagtggtgaacgcattcactgcctggacatcctgtttgca
ttcacaaaacgtgttctaggtgagggtggggagatggatatcctgagggcgcagatggag
gagcgcttcatggcctccaatccttccaaagtgtcctacgaacccatcacgaccactctg
cgccgcaaacaggaggacatttcagccactgtcatccagagagcgttcagaaattatgca
aagaaaaatcctgccagtaagccctcggacacatccaatgatgacattcaaaagaatgaa
acgctcattgacaatcaggttgttgtcaccgatgaactcaaaaaacattcttccgccgat
agaagcgaactaccaccttcaactgcctctcagccgtcaggtaacagtgtgaccacagat
gaaaaaaacaaatatgaaaaagacaaaagtgaaaaggaggttgcggccaaagatgtccaa
gagcatgatatataa
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