Scophthalmus maximus (turbot): 118283771
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Entry
118283771 CDS
T09850
Symbol
capn1a
Name
(RefSeq) calpain 1, (mu/I) large subunit a
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04141
Protein processing in endoplasmic reticulum
smau04210
Apoptosis
smau04217
Necroptosis
smau04218
Cellular senescence
smau04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118283771 (capn1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118283771 (capn1a)
04217 Necroptosis
118283771 (capn1a)
04218 Cellular senescence
118283771 (capn1a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118283771 (capn1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118283771 (capn1a)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
118283771 (capn1a)
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C2: calpain family
118283771 (capn1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
118283771
NCBI-ProteinID:
XP_035462008
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All DBs
Position
10:11646452..11655010
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AA seq
704 aa
AA seq
DB search
MYPAGGISATIHANRLRAEGMGSKEQAVHFANQDYEALKQECVESGCLFEDPCFPAEPPS
LGFKELAPYSSKTRGVEWMRPTELTGDPQFIVGGATRTDICQGALGDCWLLAAIGSLTLN
ERLLHRVVPHGQSFQDDYAGIFHFQFWQFGEWTDVVIDDRLPVKDGELMFVHSAEGNEFW
SALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELSKAPRDLYRIIAKALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTGLKEVDFRGNMTRLIRVRNPWGQVEWTGAW
SDNSPEWEEIDSSEREDLHLKMEDGEFWMSFSEFTRQFNRLEICNLTPDALSEDSVNHWN
TIKFHGTWRRGSTAGGCRNHPNTYWINPQYKITLLEEDDDPEDDEVACSFLVALMQKDRR
RYRRQGQDMHTIGFALYEIPEEYRGCQNVHLKKNFFLSQSSCARSETFINLREVSTRLRL
PPGEYLIVPSTFEPGKEADFVLRVFTEKQSETEELDDQVSADLEDDEDITEDNIDDSFKS
MFAQLAGEDMEISIRELRTILNRVVTRHKDLKTDGFSMESCRTMINLMDKDGSARLGLVE
FQILWNKIRKWLVIFRQFDLDKSGAMSSYEMRLAVEAAGFKLNNRLNQILVARYAENEMI
DFDNFICCLVKLEAMFRSYQQFDKEGSGVVEINLTEWLYLTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtatccagctggagggatttctgcaaccatacacgccaacaggctccgggcagaaggt
atgggctccaaggagcaggctgtgcactttgccaaccaggactacgaggcactgaaacaa
gaatgtgtggagtccggctgcctgtttgaagacccctgtttcccagctgagcctccatcc
ctgggcttcaaggagctcgccccctattcctccaaaactagaggtgtggagtggatgaga
cccacggaactgacaggggaccctcagttcatagtgggtggtgccaccagaacagacatc
tgtcagggagcactcggtgactgctggctcttggcagccatcggctctctcaccctgaat
gagaggcttcttcatcgggttgtcccacatgggcagtccttccaagatgactatgctgga
atcttccactttcagttctggcaatttggcgaatggacggatgttgtgattgatgacaga
ctgccggtcaaagacggggagctcatgtttgtccactcggcggagggcaatgaattctgg
agtgcgctcctggagaaggcttatgctaagctgaatggctcctatgaggctctgtcgggg
ggaagcaccactgaagggtttgaggacttcacaggtggtgtgtctgagatgtacgagctc
agcaaggcacccagagatctgtacaggatcatcgccaaagctctggagagaggctccctg
ctgggctgctctatcgatatcaccagtgcattcgacatggaggctgttacattcaagaag
cttgtgaagggccacgcctactccgtcactggcctgaaggaggtcgatttccgtggcaat
atgacacgcctaatccgagtacgtaacccatggggccaggtggagtggactggtgcctgg
agtgacaattcgcctgaatgggaagagatcgactcttctgaacgagaggatttgcatctg
aagatggaagatggggagttttggatgtccttcagtgaattcacgaggcagtttaaccgg
ctagagatctgtaacttgactccagatgctctcagcgaggacagtgtcaaccactggaac
accattaagttccacggcacttggagaagaggcagcaccgctggaggctgcaggaaccat
cccaacacgtattggatcaatcctcagtataagatcacgttgctggaggaagatgatgat
cccgaggatgatgaggtggcgtgcagttttttagtagcgctcatgcagaaggaccgccgc
agatatcgacgccaaggtcaggacatgcacaccattggctttgctctctatgagatccca
gaagagtacagaggctgccagaatgtccacttgaagaaaaatttctttttgagccaatca
tcgtgtgcacgctcagagaccttcattaacctgagagaggtgagcacacgactgcgcctg
cccccaggagagtacctcatcgtcccctccacgtttgagcccggtaaagaggccgacttt
gtcctcagagtcttcactgagaagcagtcagaaacagaagaactggatgatcaagtctct
gccgatctagaagacgatgaggatataactgaagacaatattgatgactcctttaagtcc
atgtttgctcagctagcaggagaggatatggagatttctattcgagaacttaggaccatt
ctaaacagagttgtcaccagacacaaagacctgaagaccgatggcttcagtatggaatca
tgtaggaccatgatcaatctgatggataaagatggtagtgcccgtttgggacttgtggag
tttcagatcctctggaacaagatccggaagtggctggtcattttcaggcagtttgacctt
gacaaatcaggagccatgagctcatatgagatgcgtcttgctgtggaggcagcaggtttt
aaactaaataaccgactgaaccagattctggtagcacgatacgcagagaatgagatgatt
gactttgacaacttcatctgctgcttggtcaagcttgaagccatgtttaggtcttaccag
cagttcgacaaggagggatcaggagtggttgagattaatctcacagagtggctttacctg
acaatgtgtggatga
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