Scophthalmus maximus (turbot): 118289750
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Entry
118289750 CDS
T09850
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04080
Neuroactive ligand-receptor interaction
smau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118289750
04082 Neuroactive ligand signaling
118289750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118289750
Ion channels [BR:
smau04040
]
Ligand-gated channels
GABA-A
118289750
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
118289750
NCBI-ProteinID:
XP_035472624
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Position
18:3698078..3717432
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AA seq
472 aa
AA seq
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MHTDVLLLSLLLWTVGVSGLTRQQRGRTLQPHRRLRSKREMPLTEGSGRKIGSHMLKRSP
DMTKAWGTKSEQLLRIDDHDFTMRPGFGGPAVPVGVDVQVESLDAISEVDMDFTMTLYLR
HYWKDERLSFRSNNNQSMTFDGRLVKKIWVPDMFFVHSKRSFTHDTTTDNVMLRVYPDGK
VLYSLRVTVTAMCSMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKEGNRSLNTDERISL
SQFLIQEFHTTARLAFYSSTGWYNRLYINFTLRRHVFFFLLQTYFPATLMVMLSWVSFWI
DRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAV
NYLSTLEERKERQLREGLLCTCGVTHPGMMSVCYSEMDVNTTGNYGMPEENGVKRERMLV
QLAMETDQVTGHVSSGAYSSVWVHTHAIDKYSRVIFPGSYILFNTIYWSIYS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcacacggatgtcttgctactcagcctgctgctctggacggtcggtgtgtccgggctg
acgcgccagcagaggggacgaaccctgcagccgcacagacgcctcagatcgaaaagagaa
atgcctctaacggaaggatccggtcgcaagattggcagccacatgctcaagaggagtcca
gatatgactaaagcctggggtacaaagtcggagcagctgctgcggatagatgaccatgac
tttaccatgcggccggggttcggagggcctgctgtccccgtaggagtggatgtgcaggtt
gaaagtctggatgcaatttcagaggttgacatggacttcaccatgaccctgtatctgagg
cactactggaaagacgaacgcctgtccttcagaagcaacaacaaccagagcatgactttc
gatggccgactggtgaagaaaatctgggtgcctgacatgttctttgtccactccaagagg
tccttcacacatgacaccaccactgacaatgtgatgctgcgagtgtaccccgatggcaaa
gtcctgtacagcctcagagtgacggtcacagccatgtgcagcatggacctgagtcgcttt
cctctcgatacacaaacgtgctctttggagatagagagctatgcgtatacggatgatgac
ctgatgctgtactggaaagaagggaaccgctcattaaacacagatgagagaatttctctc
tcccagttcctcatccaggagttccacaccaccgccaggctggccttctacagcagcacg
ggctggtacaaccgtctgtacatcaacttcactctgcggcgtcacgtcttctttttcctg
ctgcagacctacttccctgccaccctgatggtcatgctgtcctgggtgtccttctggatc
gaccgcagggccgtccccgccagagtgccactgggcataaccacggtgctcaccatgtcc
accatcatcaccggagtgaacgcctccatgcccagggtctcctacatcaaagctgtggac
atttacctctgggtcagctttgtcttcgtcttcctgtctgtgatagagtacgctgcagtc
aactacctgtcgacgctagaagaacgtaaggagaggcaactcagagaagggctgctgtgc
acctgtggcgtgacccacccgggcatgatgtcagtctgctacagtgagatggatgtcaac
accacgggcaactatgggatgccagaggagaacggggtgaaacgggagaggatgctggtg
cagctggcgatggagaccgaccaggtcaccggccacgtcagctccggtgcctacagcagc
gtgtgggtccacactcatgctatagacaagtactcccgggtcatttttcctggttcgtac
atcctcttcaacactatctactggtccatctactcctaa
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