Scophthalmus maximus (turbot): 118299170
Help
Entry
118299170 CDS
T09850
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118299170 (smc4)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
118299170 (smc4)
Condensin II
118299170 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
TPR_MLP1_2
AAA_29
HIP1_clath_bdg
NDC80_loop
APG6_N
DUF1482
Crescentin
Motif
Other DBs
NCBI-GeneID:
118299170
NCBI-ProteinID:
XP_035478555
LinkDB
All DBs
Position
11:12419482..12436651
Genome browser
AA seq
1311 aa
AA seq
DB search
MHLQNVHSLPPRRHTFQIMPSKTASAKPRGKGSQPRDGSGDELDAPPPENNPNGGEEAPP
TTDPSHGEAAEAADQRSLDEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQI
LGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTV
EVHFQKIIDKEGDDYEVIPNSKFYVSRTANKDNSSAYHINGKKATFKEVGALLRSHGIDL
DHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPIQTLSRRIEQLNEQ
RGEKLNRVKLVEKEKNALEGERKKAVEFLTLENDIFKHKSQLCQYYVHDLHNRVVDKEQE
RQKILEDTKELTEKNTKISQEMEKRNQELKNVEKKQNKLNKYIETQKEKFTQLDLQDVEV
REKIKHSKSKNKKLQKQLEKDKEKLEEVRGVPASSEKAISEATVHKEELETQKVKEEDKL
KEVMESLKEETSGLQQDKETKEKELMELSKAVNETRSRMDLAQSELDIYLSRHNTAVTQL
NTAKQTLQTTSDTLRERRAAIKDLEVKIPQTEQELKKGEGELEHLMKMDNDSREVVREMR
QKVDEAKSSLSSNRSRGKVLDALMQQKRRGTIPGIFGRLGDLGAIEEKYDVAISSSCGAL
DNIVVDTIDTAQKCVTFLKEQNIGVATFIGLDKMKVWEKNMAPIRTPEDTPRLFDMVRVK
DQSVRPAFYFALRDTLVAQDMEQATRMAFQKDKRWRVVTLKGQIIEMAGTMTGGGRIMKG
RMGSSIGTEVSQEELDRMESKLNEKVSTLQGCQERKLQIEENVQRLRPQLRDMKNTLEKY
ANSMTSLADQEAHMKVQIKELEANVLAAAPDKAKQKQMEKSLGAFKKDYEAASSKAGKVE
NEVKRLHNLIVDINSHKLKAQQDKLDKVNKELDDCSSTITKAQVAIKTAGRNLKKCEESV
NRVQLELEENEKSMAELTDLLKKLEDEAGEIMKACQEAEAELPEVQEQYQGVLKDIKVLQ
QQEHALQEESLSVRLRIEQIETTIAEHNNKIKHWQKEASKLSLHTVEDKPAEELPVLTPA
QLKEISDPNVIINKMITLETQCAQMKPNLGAIAEYKKKEELYLQRVAQLDEITTERDRFK
RGYEDLRKQRLNEFMTGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPP
KKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQT
KNAQFIIISLRNNMFEIADRLIGIYKTHNTTKSVGINPKTIVFKEHDAVTA
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgcacttacagaacgtgcacagtctgcctcctcgccgacacacatttcaaatcatgcct
tcgaaaactgcctccgccaagccccgagggaaggggtcgcagccccgggatgggtccggg
gacgagctggatgcccccccaccagaaaacaaccccaacggcggagaggaggcaccgccg
acaactgatccgtcccacggggaagctgccgaggcggcggatcagcgcagtttggacgag
atcctcggcagcatccctccacccccgccccctgcaatgaccaatgaaccgggcgctcct
cgcctgatgatcacacatctagtcaatcgcaactttaagtcgtacgcgggcgagcagatt
ctggggccttttcacaagcgcttttcctgcatcattggtccaaatgggagtgggaagtcc
aatgtgatagattcaatgctctttgtgtttggatacagagctcaaaagatcagatcgaaa
aagctctcagtgctgattcacagctctgataaacacaaagatgtccaaagctgcactgtg
gaggtgcattttcaaaagatcattgataaggaaggagatgactacgaagttattcccaac
agcaagttctatgtttccaggactgccaacaaagacaattcctcagcctaccatatcaat
ggcaagaaagccacattcaaagaagtgggggctttactccgaagccatggtatagaccta
gaccacaacagatttctgatcttacagggtgaggtggagcagattgccatgatgaagcct
aaaggtcagacggagcatgacgagggcatgctggagtacctggaggacatcattggctcc
tgccgcctgaaggagccaatccaaactctgtcccgccgcattgagcagctcaatgagcag
aggggagagaagctaaaccgagtaaagctggtggaaaaggagaagaatgctttggaggga
gaaaggaagaaagcagtggagtttctcaccctggagaatgacattttcaaacacaagagt
cagctttgccaatattatgtccatgatctgcataatcgtgtggtggataaagagcaagaa
aggcagaagatcttggaggacaccaaggaactcactgagaaaaatacaaagatatcacag
gaaatggagaaaaggaaccaagaactcaaaaatgtggagaagaaacaaaataagctcaac
aagtacattgagacccagaaggagaagttcacccagctggacctgcaggacgttgaagtg
cgtgagaagattaaacactccaagagcaagaacaagaaactgcagaagcagctggaaaag
gacaaagaaaagctggaggaagtgcgcggcgtaccagccagcagtgaaaaggcgatctct
gaggcaacagttcacaaggaagagctggagacgcagaaggtgaaagaagaggacaaactt
aaagaggtcatggagagtctgaaagaagagaccagtggcttgcagcaggacaaagagacc
aaagagaaagaactaatggaactcagcaaggctgtaaatgagacccgttcccgtatggat
ctggctcagtcggaactcgacatctaccttagccgccacaacacggctgtgacgcagctc
aacacggccaagcaaacgcttcagacgacctctgacactctgcgagaacgccgtgccgcc
atcaaagacttggaggtcaagataccgcagacagaacaggagctcaagaagggtgaggga
gagttggagcatctgatgaagatggataatgactctagagaagtggtgagggaaatgagg
cagaaggttgacgaagccaagagttctctgtcctccaaccgcagtcgaggaaaggtcctg
gatgccctcatgcagcagaagaggcgtggcacgatccctggcatctttggaagattgggc
gaccttggagccatagaggagaagtatgatgtggctatttcctccagttgtggtgctctg
gacaatattgtggtggataccattgacacagctcagaaatgtgtcacgttcctcaaagaa
cagaacattggggtcgccaccttcatcggtctggacaagatgaaggtgtgggagaagaac
atggctcccattcgcaccccggaggacacccctcgtctctttgacatggtgcgagtgaaa
gatcagagtgttcgaccggccttttactttgccctgagggacaccctggtggcccaggac
atggagcaggccacacgaatggccttccagaaggacaagcgctggagagtggtcaccctg
aaggggcagattattgagatggctggtaccatgaccggaggaggaagaataatgaagggc
agaatgggctcttctatcggcaccgaggtctcccaggaggagctggatcgtatggagagc
aagctgaacgagaaggtgtccacgctgcagggctgccaggagaggaagctgcagatcgag
gagaacgtgcagcggctccgtccgcagctcagagacatgaagaacaccctggagaaatac
gccaacagcatgacgagtctcgctgaccaggaagctcacatgaaagttcagatcaaggag
cttgaggcgaacgtgctggctgccgccccagacaaggccaaacagaagcagatggagaag
agcctgggggcctttaagaaagactacgaggctgcatccagtaaggccgggaaggtggag
aacgaggtgaagaggctccacaacctcatcgtagacattaacagtcacaagctgaaggcc
cagcaggataagctggacaaggtcaacaaggagctcgacgactgctcgtccaccattacc
aaggcacaagtagccataaagacagccggccgcaacctgaaaaagtgtgaggagagtgtg
aaccgtgtgcagctcgagctggaggagaacgagaagtcaatggccgagctcacggatctc
ctgaagaaactggaggacgaggcgggtgagatcatgaaggcctgtcaggaggcagaggct
gaactccccgaggtgcaggagcagtaccagggggttctgaaggacatcaaggtcctacag
cagcaggaacacgccctgcaggaggagtcgctgagcgtccggctccgcatcgagcagatt
gagaccaccatcgctgaacacaacaacaagatcaaacactggcagaaagaggccagcaag
ttgtccctccataccgttgaagacaaaccagctgaggaacttcctgttctcactccggct
cagctcaaagaaatctctgatcccaatgtgatcatcaacaagatgatcacactggagacc
cagtgcgctcagatgaagcccaacctcggggccatcgcggagtacaagaagaaggaggag
ctgtacctgcagcgagtggctcagctggacgagatcaccacagagagggatcgattcaag
cgtggctacgaggacctgcgcaaacagcgcctcaacgagttcatgaccggcttcaacatt
atcaccaacaagctgaaggaaaattaccagatgctcacgctgggcggcgacgctgagctg
gagctcgtggacagtttggaccccttctccgagggcatcatgttcagcgttcgtcctcca
aagaagagctggaaaaagatcttcaacctgtcaggtggagaaaagaccctcagctctttg
gctctggtctttgcgctgcaccactacaagcccacacccctctacttcatggacgagata
gacgctgctctcgatttcaagaatgtctccatcgtcgcctgttacatttatgagcaaacg
aagaacgctcagttcatcatcatctctctgaggaacaacatgttcgagatcgctgatcgg
ctcatcggcatctacaagactcacaacaccaccaagagtgtgggaatcaatcccaagacc
atcgtgttcaaggagcacgatgccgtcacagcttaa
DBGET
integrated database retrieval system
