Scophthalmus maximus (turbot): 118312230
Help
Entry
118312230 CDS
T09850
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04141
Protein processing in endoplasmic reticulum
smau04210
Apoptosis
smau04217
Necroptosis
smau04218
Cellular senescence
smau04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118312230
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118312230
04217 Necroptosis
118312230
04218 Cellular senescence
118312230
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118312230
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118312230
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
118312230
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C2: calpain family
118312230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_7
EF-hand_1
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
118312230
NCBI-ProteinID:
XP_035492546
LinkDB
All DBs
Position
8:380244..390296
Genome browser
AA seq
753 aa
AA seq
DB search
MFGGVSVRIQKDRLRAGGLGSVQQAVLYLNQDFQALRDDCLQSGSLFEDSLFPAEPTSLG
FKELGPLTAKTRGVEWKRPTELTEDPQFIVGGATRTDICQGALGDCWLLAAIGSLTLNQR
LLHRVVPHGQSFNQQYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGSEFWSA
LLEKAYAKLCGSYEALSGGSTTEGFEDFTGGVSEMYELKKAPRDLHRIIMKALERGSLLG
CSIDITSAFDMEAVTFKKLVKGHAYSVTGLRQVEYRGQRERLIRIRNPWGQVEWTGAWSD
SSSEWNAIDAAEKDEMLCKMEDGEFWMSFQEFLRQFSRLEICNLTPDALSQDTTSFWSTV
TFEGGWRKGSTAGGCRNHPNTFWINPQYKISLLEEDDDPEDDEAACSLLVALMQKDRRRF
RRHGQDMHTIGFAIYEIPDEYRARPSLHLKKDFFLRHSSCARSESFINLREVSTRLRLPP
GEYLVVPSTFEPSQEADFVLRVFTEKQSETKEMDDDVEGTFEQEEEITESDIDDSFRSMF
AQLSGDDMEIDVRELRTILNRVVSKHRDLQTDGFSLESCRAMVGLMDKDGSARLGLLEFQ
ILWNKIRKWLGIFREFDLDKSGCMSSYEMRLALENGGFKLNNKLHQTLVARYADNEVIDF
DNFTCCLVKLEAMFKAFKDLDKDGTGSVEVNVIEVTRIKISSETRSEPNQNQISTRLKTD
QGQIKTGSEPGQNQIRTRSEPGQNQIRTRSEPD
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggggcgtgtctgtgcggatccagaaggaccggctgagggctggaggtctcggc
tcggtccagcaggcggttctctacctgaaccaggacttccaggccctgagggacgactgc
ctgcagagtgggtccctgttcgaggactctctattcccagcagaaccgacctcactgggc
ttcaaggaactcgggccgctcaccgccaagacccgaggggtggagtggaagagaccgacg
gagctgacagaggaccctcagttcatcgtgggcggagccaccaggaccgacatctgtcag
ggggctctgggagactgttggctgctcgccgccatcggctctctgactctgaaccagcgg
ctgctgcaccgcgtcgttcctcacggtcagagcttcaaccaacaatacgccggcatcttc
cacttccagttctggcagttcggggagtgggtggacgtggtgatcgacgaccgtctgccc
gtcaaagacggagagctgatgttcgtccactcggccgaaggcagcgagttctggagcgct
ctgctggagaaggcctacgccaagttgtgcggctcgtacgaggcgttgtctggcggcagc
accaccgaaggcttcgaggatttcacgggcggcgtgtcggagatgtacgagctgaagaaa
gctcccagagatcttcatcgtatcatcatgaaagctctggagagagggtcgttactgggc
tgctccatagacatcaccagcgccttcgacatggaggctgtgaccttcaagaagctggtc
aaaggtcacgcctactcagtgacgggactccgacaggtggagtaccgcgggcagcgcgag
cgtctgatccggatcaggaacccctgggggcaggtggagtggaccggcgcctggagcgac
agctcctcagagtggaacgccatcgacgccgcagagaaggacgagatgctctgcaagatg
gaggacggagagttctggatgtctttccaggagttcctgcgtcagttctccaggctggag
atctgtaacctgacgcccgacgctctcagtcaggacaccaccagcttctggtccaccgtc
accttcgagggcggctggaggaaggggagcaccgcggggggctgcaggaaccatcccaac
acgttctggatcaaccctcagtataagatctccctgctggaggaggacgacgaccccgag
gacgacgaggccgcctgcagcctcctggtggctctgatgcagaaggaccgccgccgcttc
cgccgccacggacaggacatgcacaccatcggcttcgctatctacgagattcctgacgag
taccgagctcgtcccagcctccacctgaagaaggacttcttcctgcgtcactcctcctgc
gctcgctccgagtccttcatcaacctgcgcgaggtgagcaccaggctccgcctcccgccg
ggcgagtacctggtcgtcccctccacctttgaaccgtcgcaggaggccgacttcgtgctg
agggtgttcacggagaaacagtcggagaccaaggagatggacgacgacgtggagggaacc
ttcgagcaggaggaggaaatcacagagagcgacatcgacgactccttcaggtccatgttc
gctcagctgtcgggagacgacatggagatcgacgtgcgagagctcaggaccatcctgaac
cgggtcgtgtccaagcacagagacctgcagactgacggtttcagcctggagtcctgcaga
gccatggtcggcctcatggacaaagacggcagcgcgcggctcggtctgctggagtttcag
attctctggaacaagatcaggaagtggctgggaatcttcagagagttcgacctggataag
tccggatgtatgagctcatacgagatgcgtctggcgctggaaaatggcgggttcaaactc
aacaacaagctgcaccagacgctggtcgctcgctacgccgacaacgaggtcatcgacttc
gacaacttcacctgctgcctcgtcaaactggaggccatgttcaaggcgttcaaggacctg
gacaaagatgggacaggaagtgtcgaggtcaatgtcatcgaggtaacaagaattaaaatt
tcctcagaaaccagatcagaaccaaatcagaaccagatcagcactagattaaaaacagat
cagggccagattaaaacaggatcagaaccaggtcagaaccagatccgaaccaggtcggaa
ccaggtcagaaccagatcagaaccaggtcagaaccagattaa
DBGET
integrated database retrieval system
