Scophthalmus maximus (turbot): 118313363
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Entry
118313363 CDS
T09850
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118313363 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118313363 (ttc37)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
118313363 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_19
TPR_14
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_11
TPR_9
ANAPC3
ARM_TT21_C
Aip3p_Bud6_N
PknG_TPR
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
118313363
NCBI-ProteinID:
XP_035494636
LinkDB
All DBs
Position
19:complement(16027183..16041537)
Genome browser
AA seq
1576 aa
AA seq
DB search
MSSKEVKTELKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQSQ
SAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKLELPNIYQKLVELYASSDKNKSYELIK
KLSDIYQSDKDYVKLAKVWQQLIQLKEDDAVDKAELLQLWQEMTQLLSDCLNEDEPDNEM
QQHLITAFENTMVLVEPVPGEKHKKISADHIKCLSKLPQEEARLKKACESMLSHYPNQSY
PLEVLCSHYLKAGILNADAISCFSRLLDLAPDCGLGHLGLGTKALQEGRYKDAIKDLAHG
LKKMSCSTGWYSLAEAQFKVHGYSDSATSCSQGLMMCVSGDEELRVKLLRMKLETLVRSG
GEKAADHALDAFSQIPDADKDEVLVALKGHAFLNKGQIDQALKVSSELVASNPNLAQGFA
LRGLVHSAEGQQQLAEQSFLKAAAQSPLCGEYYFLLGQLYWDMGEETRKDRSKAHTHLLK
AAKLDPNLGCVFRYLGHYYREIANDRGRARGCYKKAFELDSEDAESGSASVDLSMEQEDM
DAALATLESVIEKATPGSAKWAWMRRGLYYLKVGEHQQATADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALRAFAKAHQLQPSSIYSLYQAAAIKQTLGKFKEAAAEYLQITAQQDY
VPALKGLGECQLSLAKGRMEDCRDGGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACT
AVSTVSPNRAHVLVPGPLAGLDPNSQSPTLNQAQTLKVGERCYARALKLMSEVASLWYDL
GLNYHHQARLPCSTEGDQNLQSLVLEKSLQCLKKAIMMDCENYSYWNALGVISMNKGLEN
FALAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELSTHVEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIHSDPEAYIMLGYLNEHLQLKRQALQAYQRAVELLQSTSSAEELAFA
LGSYGRALCTSGQWEEAVHVYNSTPLQELSDLTGLALAYCRAGLLPESTSAYERALAVAS
TEKEKAYILTALALLQHLQGNIDSAKTLLFKCSILKEPIPESLLCLCALGLVRGDATLAA
AALTELLKQGSATGSVVEQRCLLTCTLLALQGNYSSVQREVSRAVHSNPGNPSLWALLSR
VVPQFYPRKANGGAVAGHVACLSSMTNGKEIVFLQRALLYSGVNQLASGRHSGEDRHRNA
LKTMQRAVLLCPDDPAAWAGLMAACHTENTACYLSGSAPCRQGLEKTLMSVVSEKVQSVE
EIERPLAQTLEGWVLQQAVTGLMLGGQLDQAEALCSQVLNVSPEHPAVMLSLRQVQCQRL
LVADAGTVLPDSVLEQLNNTVMMNPTNLGAWHWLAEVYRGQGLLVQAVMAYRQSLQLASQ
LSLHSGQVACLIRLALLALVPCMAGVPGNNWKDLVVEATTEVLKLGSSPMAHLFQALLQY
MTKMAARETRRLLERLVYVSSQDFPATLVQVASWYLLRHLHAKNDQELINALLHHAKSKG
DERLLEFNSLLASSST
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaagaagtgaagacggagctgaaaagtgccagagaggccattaaaaacaaa
gagttcaaagaggctcttaaacattgcaaggctgttttgaaactcgagaagaacaactac
aatgcgtgggtattcatcggcctggcagccagtgaactcgagcaaccagatcagtctcag
tccgcctataaaaaggcagtggagctggagcctgagcagctgctggcctggcagggttta
gccaatctttatgagaagacagaccagtgggacttcaaacttgagctacctaacatttac
cagaagcttgttgagctgtatgccagctcggacaaaaacaaaagttatgagttgatcaaa
aagctgtctgatatttatcagtctgacaaagattatgtaaagctggcgaaggtttggcag
cagctcattcagctgaaggaggacgacgctgtggacaaggcagagttactgcagctttgg
caggagatgacccaactcctctcagactgccttaatgaggatgagccggacaatgaaatg
caacagcatttaatcacagcgtttgagaacaccatggttctcgtggagcctgtaccagga
gagaaacacaagaagatctcagcagaccacattaaatgtctgtctaaactgccacaagaa
gaagcaagactgaaaaaggcatgtgagtctatgctctcccactacccaaaccaaagttat
cctctcgaggtcctttgttcgcattacctcaaagcaggtatcctgaatgctgacgcaatc
agctgcttctcccggctcctggatctggcacctgactgtgggttaggtcacttaggtctg
ggcaccaaagcacttcaggagggacgatataaagacgccattaaagaccttgcacacggg
ttgaagaaaatgagctgcagcacagggtggtacagtctggctgaagctcagtttaaagtg
cacggatactcagacagcgccacgtcatgttcccaaggtctgatgatgtgtgtgtctgga
gatgaggagctgagggtcaaactgcttaggatgaagctcgagactttggtcagaagtgga
ggagagaaggctgcagatcatgctttggatgccttttcacagattccagatgccgacaaa
gacgaagttctagtagcccttaaaggacatgcattccttaacaaaggacagattgatcaa
gcacttaaggtatcatcagagctagtggcctccaacccaaacctggcccagggttttgca
ctgagagggctggtacattcagctgaaggccagcagcagctggcagagcagagtttcctg
aaggcagctgcacagagcccactctgtggagagtattattttttgctgggacaactttac
tgggacatgggagaagagacccgtaaagaccggagcaaagcccatacacacttgctgaag
gctgcaaagttggatccaaaccttggatgtgtattccgctaccttgggcattattacagg
gaaatagctaacgatcgtggccgcgcacgcggctgttataagaaggcgtttgagttggac
agtgaggatgctgagtccggaagtgcctcagtggatctcagtatggagcaggaggatatg
gacgctgccttggcaacactggagtcagtgatagagaaagccactccaggctccgctaaa
tgggcctggatgagacgaggcctttactacctgaaggtcggagagcatcaacaggccaca
gctgatctgcaggcagctttgagagcagacccagaggactgggtttgttgggagtgttta
ggcgaggcctacctaaaccgccggagcttcacggctgctctgagggcctttgctaaggcc
catcaacttcagccctcctcgatctacagtctttaccaggccgctgcaatcaaacagacc
ctgggcaagttcaaagaggcagctgcagagtatttgcagatcacagcacagcaggactac
gttcctgctcttaaaggtcttggcgagtgccagctgtctctggcaaaaggtcgaatggag
gactgcagagatggtggagccattgacctcattcagcaagccatacagaacctcttcaga
gctgtggagctgcgtccagacctgtcctgtttgtggaagctgctgggagatgcatgcaca
gcagttagcactgtttcgccgaacagagcacacgttcttgtgcccggcccgctggctggt
ttagaccccaactcacagagccccactctgaaccaggcccagacgctcaaagttggcgag
aggtgctatgctcgcgccttgaagctgatgtctgaggtcgccagcctttggtatgaccta
ggactcaactatcatcaccaggctagactgccatgctcgacagaaggagaccagaacctc
cagtctctggtcctagagaagtctctgcagtgtttgaaaaaggccatcatgatggactgt
gagaactacagttactggaatgccctgggagtgatttccatgaacaaaggtcttgagaac
tttgctctggctcaacattgcttcatcaagtccatacaagttgagccaaataatgtggtt
gcttggacaaaccttggtaccctctatttgaagaaggacaatatagagcttgcacatgag
gccttcaagattgctcagtccttggagccactgtatgtcaactgctggattggacaggca
ctgatagcagagcgagtgggaagctatgacaccatggatcttttcaggcacaccactgaa
ctcagtacacatgtggaaggagtgaaaggttacgcctactgggtttgttccaccctgctg
gataagagcaacagagactctgaactgtatcgctacaacatagtccagatgaacgccatc
tctgctgctcaggtcgctctcagcaagtacacagagaggatccactccgaccccgaagcg
tatatcatgctgggatacctgaatgagcatctgcagctaaagagacaggccttacaggcg
taccaaagagctgttgaactgctgcagtccacgtcctcagcagaagaattggcttttgct
ctgggcagctacggccgtgctttgtgcacatcgggccaatgggaggaggcagtgcatgtt
tataattccactccactgcaggagctgagtgatctgactgggctggctctggcctactgc
agggcaggactcctcccagagagcaccagcgcctatgaacgggccttggctgtggcttcc
accgagaaggagaaggcttacatcttgacagctctggccctgctgcagcacctgcagggc
aacatagactcagccaagactctgctgttcaaatgctcaatcttaaaggagccaatccca
gagtctctgctgtgtttatgtgccctggggttggtccgtggtgatgctacattagctgcc
gctgcgctgactgagctgctgaagcaaggctcggccactgggagtgttgtagagcagcgg
tgtttactcacctgcaccttgctggccctgcagggaaactacagttcagtgcagagagag
gtttccagagctgtacacagcaatcctggaaacccctctctgtgggccctgctgtccaga
gtggtaccacaattctaccccaggaaggcaaatggtggagcagtggctggtcatgttgcc
tgtctctccagtatgaccaacggaaaggaaattgtgttcctgcagagggcgttgttgtac
agtggagtgaaccagctggcgagtggaagacactctggagaggaccgtcacaggaatgcc
ctgaagacaatgcagagagctgtgctgctctgtcccgatgatccagcagcgtgggcagga
ctaatggccgcctgtcacacagaaaacacagcctgttacctttcaggttctgctccctgc
agacaaggactggagaaaaccctcatgtccgtggtttctgagaaagtacaaagtgtggag
gagatagagcgccctctagcccagactcttgagggatgggtactacaacaggcagtgaca
ggtctcatgctggggggacagctggatcaggcagaagccctctgctcacaggtgctgaac
gtttccccagaacacccagcagtgatgctgtcactgagacaggtgcagtgtcagcgcctc
cttgtggcagatgctggtactgtcctcccagactctgtactggagcagctcaacaacaca
gtgatgatgaaccccaccaacctcggggcctggcattggctggccgaggtgtatcgtggg
cagggactgcttgtccaggcagttatggcttacaggcagagcctgcagctcgcctcacag
ctcagcctgcacagtggccaggttgcctgcctgatccgattggccctcctagctctggtt
ccctgtatggcaggggtccccggaaacaactggaaggacctggtagtggaagccactact
gaggttttgaagctgggctcatcccccatggctcacctcttccaggccctgctccagtac
atgaccaagatggcagccagggaaacgaggcgtttgttggagaggctggtgtacgtttcc
tctcaagacttcccagcgacactggtgcaggtggccagctggtacctcctcagacacctg
catgccaagaatgaccaggagctgattaatgcccttttgcaccatgccaaaagcaaggga
gatgagagattgctggaatttaattcactccttgcctcttcttcaacctga
DBGET
integrated database retrieval system
