Scophthalmus maximus (turbot): 118316291
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Entry
118316291 CDS
T09850
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04110
Cell cycle
smau04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118316291 (smc1a)
04114 Oocyte meiosis
118316291 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118316291 (smc1a)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
118316291 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
118316291 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
118316291
NCBI-ProteinID:
XP_035499849
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All DBs
Position
3:complement(12672776..12683123)
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AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRAIIGSSSEYRINSKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYERRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKGDMDELDKEMKAVELTKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEMAKRRIDEINTELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIHSREKEITDLRDRMNLVEDEVFVDF
CEEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
ESSSQRTSSSVLAKEALIEIDYSNLSEDLKDTLSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERYDRFNTCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVLNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggctatttaaaactgatagagatcgaaaacttcaagtcgtataaaggacgacagatc
attggaccgtttcacaagtttactgcaatcatcggacccaatggatctggaaagtccaac
cttatggatgccatcagcttcgtgctggcagagaagaccagtaacctgcgtgtgaagact
ctgaaggatctaatccacggagcgcctgtggggaagccagctgccaacagagcctttgtc
agtatggtgtatcaggaggataatggagaggaacgttccttcacaagggccattattggt
tcctcctctgagtaccgcatcaacagcaaggtggtgggcctgcctgaatacagtgaggag
ctggaaaaactcggcatcctgatcaaagcaaggaacttcctggtatttcagggagccgtg
gagtcaattgccatgaagaatcccaaggagcgcacagctctgttcgaggagatctcccga
tccggagagctggcccaggaatatgagcgcaggaagaaggagatggtgaaagcagaagag
gacacccagttcaattatcatcgcaagaaaaacattgccgccgagcgcaaagaagcaaag
caagagaaagaggaggctgagcgttaccagcgtctgaaggacgaagtagccagggccagt
gttcagttgcagctcttcaagctgtaccacaacgagactgagattgagaagctgaacaaa
gagctggggcagcggaacaaggagattgacaaggaccgtaaaaagatggaccatgtggag
gaggagttgaaggacaagaagaaggagctgggccggctaatgagggagcagcagaccatt
gagaaagaaatcaaagagaaggactctgagttgaaccaaaagaggccgcagtacatcaag
gccaaagagaacacctcacacaagatcaagaagcttgaggctgcgcgcaaatcattgcaa
aatgcccagaagatgtacaagaaacgcaaaggagacatggacgagctggataaagagatg
aaggcggtggagttgaccaagcaagagtttgaggagagaatggaggaggaggcgcagagc
cagggccaggacctcaccctggaggaaaaccaggtcaagcagtaccatcgtctgaaagag
gaggccagtaaacgtgctgctacactggcacaggagctggagaaattcaaccgggaccag
aaggccgaccaggaccgccttgacttggaggagaggaagaaagtcgagacagaggccaaa
atcaaacagaagatccgtgaaattgaggaaaaccagaaacgtattgagaaattagaggat
tatattaccaccagcaggcagtcactagatgagcagaagcgcatggaggaggagctgacc
gaggaggtggagatggccaagaggaggatcgatgagatcaacacggagcttaatcaggta
atggagcagctgggtgacgccagaatcgacagacaggagaacagtcgccagcagcgcaag
gccgagatcatggagagcatcaaacgactctaccctggctctgtgtatggtcgtctaatt
gacctgtgtcagcccactcagaagaagtatcagatcgctgtgaccaaagtgttgggcaag
aacatggatgccatcattgttgactctgagaagactgggagagactgtattcaatacatc
aaagagcagagaggagagcccgagaccttcctccctctcgactaccttgaggtgaaacca
acagatgagaaactgcgagagctgcgaggagccaagctggtgatagatgtgattcgctac
gaaccgcctcacatcaagaaagccctgcagtatgcgtgtgggaacgccctggtctgtgac
aatgtagaagacgcacggaggatcgcctttggagggccatacagacacaagactgtagcg
ctggatggtactctgttccagaagtctggagtcatctctggaggagccagcgacctgaag
gccaaggccaggcgctgggatgagaaggcagtggacaagctcaaggaaaagaaagaaaaa
ctcacagaagagctcaaggagcaaatgaaggccaagaggaaggaggccgagctgcgtcag
gtgcagtcccaggcccacggtctgcagatgagactcaagtactcccagagtgacctggaa
cagacaaaaacccgccacctctccctcaacatgcaggagaagtcaaagctagagagtgag
ttggcaaactttggacctcgcatcaacgacatcaagaggatcatccattcccgagagaag
gagatcactgacctacgggaccgcatgaacctggtggaggatgaagtgtttgtagatttc
tgtgaggagattggagtgaggaacatcagagagtttgaggaagagaaggtgaagaggcag
aatgagattgcgaagaagcgtcttgagtttgagacccagaagacccgtctgggcatccag
gtagactacgagaagaaccagctgaaggaggaccaggagaaagtcatgatgtgggagcag
acggtcaagaaggacgaggctgaaatagagcgacttaagaaggaggagcacagacacatg
aagatcatcgatgagacgatggcccagctgcaggacctgaagaaccagcacctcaccaag
aaatctgaagtcaacgataagaaccacgagatggaggagatccgcaaaaaactgggcggc
gccaacaaggagttgacacagctccagaaggaggtgacggccatcgagaccaaactggaa
cagaagcgcagtgaccgtcacaacttgcttcaagcctgcaaaatgcaggacatcaggttg
cctcttcgttctggaacaatggatgatatcagccagggagaggggagctcgcagacagac
gagtccagcagccagaggacgtccagcagtgttttggctaaagaggctctcatagaaatc
gactacagcaacctgtccgaagacctcaaggatacgctttcagaggaagagatcaaagcg
gagacaaacacactgcagcagcgtctgaatgagcaacagagtatcctacagaggatcagt
gcacccaacatgaaggccatggagaagctcgagagcgtcagggacaagttccaagagacc
agcgatgagtttgaagctgctcgtaagagagcaaagaaggccaagcaagccttcgagcag
attaaaaaggaaagatatgacagattcaatacctgctttgagtctgtggccaccaacatt
gatgagatctacaaagccctctcacgcaacagcagtgcccaggctttcctgggcccagag
aacccagaggagccgtacctggacggcatcaactataactgtgtggctccagggaagagg
ttcagacccatggacaacctgtccggaggagagaagactgtggctgccctcgctcttctc
tttgccattcacagctacaagcctgcacccttctttgtcctggacgagattgacgctgct
ctagacaacactaacattggaaaggttgccaattacatcaaagaccagtcagtgctgaac
ttccaggccatcgtcatttctctgaaagaggagttctacaccaaggcggactcgctcatc
ggcgtttatccagagcaaggagattgtgtcatcagcaaagttctgaccttcgacctctct
cagtatcctgatgcaaacccaaatcccaatgaatag
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