Scophthalmus maximus (turbot): 118317120
Help
Entry
118317120 CDS
T09850
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
118317120 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smau03400
]
118317120 (xpc)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118317120 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
118317120
NCBI-ProteinID:
XP_035501473
UniProt:
A0A8D3ADZ4
LinkDB
All DBs
Position
3:complement(17211971..17222131)
Genome browser
AA seq
927 aa
AA seq
DB search
MAKRRRGAETAAGTKTARQVRTAKKKKSKSGEAKKKEAGNGITEKEEKIERKITPKSRLS
SKLAAKINAPSKSTITTTAVNASKYFQSPVKEEESDSDDDFDMVTSPARMFNATKPEKEK
EEEDSEEDEDDWEEVEELAGPLGTAEPPEPALPSQPLEIEIETPEVRKKQKRQAEFETYL
RRMMNKYNKDMLIDTHKVHLMCLIASGMFHNRLCSEQDLLAITLSLLPTHYGMVAKERID
QNYLSGLLKWFRATFTLNPSLPCEERPDPRALLERRLASLSAKNHQEMTHLFLLVLRSLQ
LFCRLVLSLQPIPFKPPSAKGKGARTSNCASEKTSTTQETSKTTSSDTKVSPGTKRPAAG
GKAKGSRGGKKAKRKDIKEEEESSVKSGGPRPKNSKRRTVASKVSYKEESHSEGGEGLSD
EEEFQVTSDEDSEDSESEAESTKKEKGRGKTKVIKNKNTAVGGGGKKRVKDEGDNEREEG
EDDGGVEEGTTNNYAKRRRGKKEEGPGADEWLEVYLEKTSSWVCVHVEHGVAMPHLCSRS
ATAPVTYVVSVDGDGFVKDLGRKYDPTWMTSSRKRRVDEDWWDETLQPFLGPEDEKDKRE
EKELQNKLLNKPLPISIAEYKNHPLYALRRHLLKYEAIYPPTASVLGYCRGEPVYSRDCV
HTLHSRDTWLKEARTVRLGEEPYKMVKGSSNRSRKARIMAELKDGNDLPLFGEWQTEEYQ
PPIAVDGKVPRNDYGNVYLFKPCMLPVGCIHLRLPNLHRVAKKLEMDAAPAVTGFDFHGG
FSHAVTDGYIVCEENEEILQAAWLEEQELQKEKEKEKREKRVISNWTLLVKGLLIRERLK
QRYGKKNPGLGGLAHGDNTGGLSSDEEEAVEGGSPGAKTASETLAMSWPQNRQAEEDGGN
SSGLTKKSTTKREKRGQEKHMFPFEKV
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcggagacggggcgcagagacggcggccggcacaaagaccgcgaggcaggtg
cggactgcgaagaagaagaagagcaagagcggggaagcgaagaagaaagaggcaggtaat
ggcatcactgagaaagaggagaagatcgagaggaagattacacccaagtcacgtttgtcc
tcgaaacttgcggcgaagatcaacgctccctccaaatccaccattaccaccactgccgtc
aacgccagtaaatacttccagtcgccagtgaaggaggaggagagcgacagtgacgacgac
ttcgacatggtgacctcaccagcgcgcatgttcaatgccacgaaaccagagaaagaaaaa
gaggaggaggacagtgaggaagacgaggatgattgggaggaagtggaagagctagctggt
ccactgggtacagctgaaccaccagaacctgcccttccctctcagcctctagagatagag
atcgagactccggaagtcaggaaaaagcagaagaggcaggcggagtttgaaacgtatctg
aggcggatgatgaacaaatacaacaaagacatgctgatagacacacacaaggttcacctc
atgtgcctgatagccagtggaatgtttcataaccgtctgtgcagtgagcaagacctgctc
gccatcactctatccctgctgcccacccactacggcatggttgctaaggaacgcatcgac
caaaactacctctctggacttctcaaatggtttagagcaacgttcactctcaatcccagt
cttccctgtgaggagcgtccagacccccgggctctcctggagaggcggctagccagcctc
tcagccaagaaccaccaggagatgactcatctgttcctgctggtcctaaggtctctgcag
ctcttctgcagattggttctttctctccagccaattccttttaaacccccatcagccaag
ggcaaaggggctagaacatctaattgtgcctcagagaagaccagcacaacccaagaaacc
tccaagaccacctcttctgacacgaaggtctctcctggtaccaagagaccagctgcaggg
gggaaagccaagggatccagaggaggaaagaaagcaaagagaaaagacatcaaggaggaa
gaggagagttctgttaagtcaggaggaccgagaccaaagaactcaaaacgccgcactgtt
gcctcaaaggttagctacaaggaggagagccacagcgaagggggagaggggcttagcgat
gaggaagaattccaggtgaccagtgatgaggacagtgaggattcagagagtgaggctgaa
tccacaaagaaggagaaagggaggggcaaaaccaaagtgatcaaaaacaagaacactgca
gtgggtggtggagggaaaaaacgggtaaaagacgagggcgacaacgagcgggaagaaggg
gaggacgatggtggagtagaagaaggaacgaccaataattatgcaaagcgaaggcgtggg
aagaaggaggaggggcctggagcagacgagtggttggaggtttatcttgaaaaaacgtct
tcctgggtctgcgtgcatgttgagcacggtgtcgcgatgcctcacctctgctcccggagt
gcgacagctccagtgacatatgtggtgtcggtggacggggacgggtttgtcaaggacctg
gggaggaagtatgaccccacctggatgacatcgtccaggaagaggcgggtggatgaagac
tggtgggatgagacgctccagccattcctgggacccgaggatgagaaggacaaaagggag
gagaaggagctccagaataaacttctgaacaagcccctgccaatctccatagcggagtac
aagaaccacccactgtacgccttgaggagacacctgcttaagtacgaagccatctaccct
ccaacggcctccgtactgggatactgcagaggagagccagtatactccagggattgtgtg
cacaccctccactccagagacacgtggctgaaagaggcacggactgtccgacttggagaa
gagccatacaagatggtgaagggctcctccaatcgttcccgtaaggccaggatcatggct
gagctgaaggatggaaatgacctgcctctgtttggagaatggcagactgaagagtaccaa
ccgccgatagctgtcgacggaaaggttcctcgtaacgactacggtaacgtctacctcttc
aagccctgcatgttaccggtgggctgcattcaccttaggctgcccaacctgcaccgagtc
gccaagaagctggagatggacgctgcccctgcggtcaccggcttcgacttccacggagga
ttctcacacgctgtgactgatggttacatcgtgtgtgaggagaacgaggagattctccaa
gctgcctggttggaagaacaagagctacagaaggagaaggagaaagagaaaagagaaaag
agggtgatctccaactggaccctgctggtgaaaggacttctgatcagagaaaggctcaaa
cagcgctacggcaagaagaaccctgggttggggggcctcgcacacggagacaacaccggg
ggcctctcatcggatgaggaggaggcggtggagggtggaagtcccggagctaagactgca
tctgaaactctggccatgtcctggcctcaaaacagacaagcagaggaggatggagggaac
agcagcggactgacgaagaagtccacaaccaaacgagaaaagagaggacaagagaaacac
atgtttccctttgagaaggtgtaa
DBGET
integrated database retrieval system
