Scophthalmus maximus (turbot): 124850122
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Entry
124850122 CDS
T09850
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124850122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smau03400
]
124850122
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
124850122
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
124850122
NCBI-ProteinID:
XP_047189281
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Position
7:complement(158643..169437)
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AA seq
739 aa
AA seq
DB search
MRRSLAPSQVAKRKQGGESCEDEEWTCRTEKRRKSSEMRENHISPFRKPLTQLSSQPACT
DGDQHEAFIRSILSKPFKIPIPNYTGPLGIRALGLKRAGVRKALHDPFAEDALVLYEPPT
LSAHDLIKAEKEKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRISGSYGCIMADEM
GLGKTLQCIALMWTLLRQSPDTKPEIDKVIVVSPSSLVRNWYNEVGKWLGARVTPVAIDG
GSKDDIDRQLVNFMSQHGLRIPTPILIISYETFRLHAGVLHKGKVGLVICDEGHRLKNSD
NQTYQALNTMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGR
DADASDRDRHTGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYK
RFLRQAKPVETLQEGKISVSSLSSITSLKKLCNHPALIYEKCVEGEEGFEGALDLFPPGY
CTKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLDG
TMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMA
RVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRELF
TLXEETTSDTHDRFRCHRCVNGQEVRPPADNSDCTSDLSQWNHCYNKKGLGDQVLKASWD
AAVSFVFHQRSHEDQKGVA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagtctggctcccagtcaggtcgccaagaggaagcagggaggtgaatcctgc
gaggacgaggagtggacatgtagaactgagaaaagaagaaaaagtagtgagatgagagag
aaccatatctctcctttcagaaagcctctgactcagctcagcagccagcctgcatgtact
gatggtgaccaacatgaggcatttattcgcagtatcctctccaagccttttaaaatccct
attccaaattatacaggcccgctgggaatcagggcacttggtctgaagcgtgcaggagtg
aggaaagcacttcacgatcccttcgcagaggatgctttggttctttacgagcccccgact
ctgagtgctcatgacctgatcaaagctgaaaaagaaaaactaccagtccatgttgttgtg
gatccagttctaggaaaagtgctcaggccccatcagagagagggggtgaagttcctgtgg
gagtgtgtgacaggcagacgcatctcaggatcgtacggctgcatcatggctgatgagatg
ggcctggggaagactctgcagtgcatcgccctcatgtggaccctgctgcgtcaaagcccc
gacactaagccagagatagacaaggtcattgtggtttcaccctccagtctggttcgcaac
tggtacaatgaagttggaaagtggctgggggcacgcgtcacaccagtggccatcgatgga
ggttcgaaggatgacatcgatagacagctagtgaacttcatgtcccagcatggtttgaga
atacccaccccaatcctgatcatttcctatgaaacctttcgactgcacgctggggttctg
cacaagggcaaagttggactcgtcatctgtgacgagggccatcgactgaagaattctgac
aaccagacataccaggccctgaataccatgagtgcccagaggagagtgctgatatcaggc
actcccatccagaacgacctgttggagtacttcagcctggtccactttgttaatgctggg
atcctcggcacagctcaggagtttaaaaagcgatttgagcttcccatcctgaagggtcgt
gatgcagatgccagtgacagagacagacacactggagaggagaaactcaaggagctgatc
agcattgtcaacaggtgtctgatcaggagaacgtctgatatcttgtcaaagtatcttcct
gtgaaaattgagcaggttgtttgttgcaggctgactcctctgcagacagagctctataag
cgcttcctgagacaggccaaacccgtcgagacattacaggagggcaagataagtgtctcc
tccctgtcttccatcacatcactcaagaaactgtgcaatcatccagcactcatctatgag
aagtgtgtggagggtgaggaaggcttcgagggggctctggatctgtttccacctggctac
tgcactaaagctgtggagcctcagctctctgggaaaatgcttgttcttgactatatcttg
gcaatgaccaggacaacaactagcgataaagtggtgctggtctctaactacactcaaaca
ctggacctcttcgagaagctgtgccgatcgagaagatacctctatgttcgactggatggc
acgatgtccatcaagaaaagggccaagattgtggaaagattcaacagtccatcaaaccca
gagttcatcttcatgctgagcagcaaggctggtggatgtggcctgaatctgattggtgct
aatcgtttggtgatgtttgatcccgattggaatccagccaacgacgagcaggcaatggcc
cgggtgtggagagacggccagaagaagacctgctacatctacagattgctctctacgggg
acaatagaggaaaagatcctgcagaggcaggcccataagaaagcactgagcagctgcgtg
gtggatgaagagcaagatgtggagcgccacttctctctgggtgaactccgagaactcttc
acactcnacgaggagaccaccagcgacacacacgacaggtttcgctgtcaccgctgtgtg
aatggccaagaggttcgcccccctgcagataactctgactgtaccagtgacctttcccag
tggaaccactgctacaacaagaagggtctgggggaccaagtgttgaaagcctcctgggat
gctgcagtctccttcgtcttccaccagcgctctcacgaggatcagaagggtgttgcataa
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