KEGG   Shewanella marisflavi: CFF01_01860
Entry
CFF01_01860       CDS       T05400                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
smav  Shewanella marisflavi
Pathway
smav03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CFF01_01860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smav03400]
    CFF01_01860
Enzymes [BR:smav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CFF01_01860
DNA repair and recombination proteins [BR:smav03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CFF01_01860
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD Helicase_C ResIII PriA-like_WH PriA_CRR AAA_30 TrwB_AAD_bind DUF5816 AAA_22 AAA_19 zinc-ribbons_6
Other DBs
NCBI-ProteinID: ASJ95430
LinkDB
Position
complement(403441..405636)
AA seq 731 aa
MSLFVEVALPVPMRQAFSYRVKETDMAKADIGVRVRVPFGRQQLIGLVTGLSSQCDLAPT
QIKSVIAFLDDQAVLPPSLYKLTQWAARYYFCSLGQMLSQALPVALRKGAEVEAQQLKIW
QVSPQGQAADIDTLKRAPAQRKLLHALLETSLSQEEINALDLSKTALKTLAERGWIECIE
KRCETDLSWRDSLELGEAPHQLNPEQAIAVATLNQQQGYTCSLLEGITGSGKTEVYLALL
ETVLKQGKQALILVPEIGLTPQTISRFKRRFKVQVAVIHSGLTDNQRLSAWRQARSGEAA
IIIGTRSALFTPMRYPGIIILDEEHDSSFKQQEGVGYHARDLAVMRGHLEKIPVLLGSAT
PSLETLQNALAGRYQHLSLGKRAGAAEKVRQGIIDIRNQPLKNGLSHALLNEMRIHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNQYAIPKQCHQ
CGSTMLMGQGVGTEQLAEALTKEFPNYPVVRIDRDTTSRKGALEGHLNAIHKGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRARKAGTVLLQT
HQCDNPILRELMHKGYGEFARGQLEERKQALLPPAWHMLLLRAEAHRAEDADSFLTQVAA
LLPQNETCEVIGPMPAPMDKKAGKFRRQLMFQTKTRSQLQQAFEQAQPQIEALPLAKKCR
WSLDRDPQDLL
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgtccctgtttgtcgaagttgccctgcccgtccccatgcgccaagcctttagctatcgt
gtcaaagagacagatatggccaaagccgatataggtgtcagggtgcgtgtccctttcggt
cggcagcaacttatcggcctggtcaccggactctcgagtcagtgcgacctggcaccgact
cagataaaatctgtcatcgccttcctcgacgaccaagcagtgctgcccccctcgctctac
aagttgacccaatgggccgcgcgttactatttttgtagcctggggcagatgctctcccaa
gcgcttcctgtggcgctgcgcaaaggcgccgaggttgaagcgcagcaactgaagatctgg
caggtgtccccccaaggtcaagccgcggatatagacacgcttaaacgcgcccccgcccag
cgcaaactgctacatgccctacttgaaacgtccctcagccaggaggagatcaatgccctg
gatctgagcaagacggcacttaagacattagccgagcgaggctggatcgagtgtatcgag
aagcgctgcgagaccgaccttagctggcgcgatagccttgaacttggcgaggcgccccac
caactcaatcccgaacaggcgatcgccgtagccaccctgaatcaacaacagggttatact
tgttcgctactggaggggatcactggctcgggcaagaccgaagtctatctggccctgctg
gaaaccgtgctcaaacagggtaaacaggccctcatcttagtgcctgaaattggcctgaca
ccccagacgattagccgcttcaaacgccgcttcaaggtacaggtcgcggtgatccattcg
gggctgacagacaaccaacgcctgagcgcctggcgccaggccagaagcggcgaggcggcc
atcatcataggcacccgctcggcgctatttacccccatgcgctaccccggcatcatcatc
ttagatgaggaacacgacagtagctttaaacagcaggagggcgttggctatcacgcccga
gatctggcggtgatgcgcggccacttggagaagatccctgtgctgctaggcagtgcaaca
ccctcactggaaaccttgcaaaatgccttggcgggccgttatcaacacctgagcctgggc
aagcgggccggggccgccgaaaaggtgcgtcaggggatcatcgatatccgcaaccagccc
ctaaaaaatggcttatctcacgccttactcaacgagatgcgcatccatctggatgcaggc
aatcaggtgctgctgtttctcaatcgccgcggctttgccccggcgctgctctgccacgag
tgcggtcatctgcatgagtgcgatcgctgcgacgccttcttcaccgtgcatcaatccctg
ggcgagatccgctgccaccactgtggcaatcaatacgctatccccaaacagtgccaccaa
tgtggtagcaccatgctgatgggccaaggagtgggtaccgagcagttggctgaggcgctg
accaaggagtttcccaactatcctgtggtgcgcatcgatcgtgacaccaccagccgcaaa
ggggcgctggaaggtcacctcaatgccatccataaaggcgagtacaagatcttggtcggc
acccagatgctggccaaagggcaccatttccccgacgtcaccttagtgggactgctggat
gtggatggcgccttgttcagcgccgattttcgcgcccccgaacgtttcggccagctctat
acccaggtctcaggccgtgccggcagggcgcgtaaggcgggaactgtgctgctacagacc
catcagtgcgacaatccgattttgcgcgagttgatgcataagggctatggcgagtttgcc
cgtggtcagctggaggagcgtaaacaagccctgctgccaccggcctggcatatgttgctg
ctgcgcgccgaggcccaccgggccgaagatgccgacagtttcctgacccaggtcgccgct
ctactgccccaaaacgaaacctgtgaagtgataggcccaatgcccgcccccatggacaag
aaggcgggcaagttcagacgtcagctgatgtttcaaaccaagacccgcagccagttacag
caggcgtttgaacaggctcagccgcagattgaagccctgccgctggccaagaagtgtcgc
tggagtctagatcgcgacccacaggatctgctgtaa

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