Shewanella marisflavi: CFF01_19050
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Entry
CFF01_19050 CDS
T05400
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smav03016
]
CFF01_19050
Transfer RNA biogenesis [BR:
smav03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CFF01_19050
Prokaryotic type
Methyltransferases
CFF01_19050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
AIG1
Ras
ABC_tran
Dynamin_N
Gtr1_RagA
AAA_28
Roc
Arf
SRPRB
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ASJ98512
UniProt:
A0AAC9XQ42
LinkDB
All DBs
Position
complement(4317292..4318653)
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AA seq
453 aa
AA seq
DB search
MTTDTIVAQATAPGRGGVGIIRVSGDKASEVAMAVLGHLPKVRYADYCDFKGANGEVIDQ
GIALFFKGPNSFTGEDVLELQGHGGQIVLDMLINRVMDVDGVRIAKPGEFSEQAFMNDKL
DLTQAEAIADLIDATSEQAAKSALNSLQGEFSTQVHELVDQVTNLRLYVEAAIDFPDEEV
DFLSDGKIAASLSKIIHKLDSVQSSAKQGAIIREGMKVVIAGRPNAGKSSLLNALAGKES
AIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDTVEQIGIERAWAEIETADQVLF
MVDGTTTDAVDPHDIWPDFIDRLPKNLGVTVVRNKADLTGEALDATDEQGHKVFRLSAKT
GSGVDELKAHLKSLMGYQSNLEGGFIARRRHLEALELAASHLTLGQEQLEVYQAGELLAE
ELRMCQLALSEITGKFTSDDLLGKIFGSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagatactatcgtggcacaagcaaccgcacccggacgtggcggcgtaggtatc
attagggtctcaggcgataaggccagcgaggttgctatggcggtactagggcaccttccc
aaggtacgctatgccgactactgtgactttaaaggcgcaaatggcgaagtgatagaccaa
ggcatagccctgtttttcaaaggacccaactcctttaccggtgaagatgttctcgagctt
cagggacacggaggccaaatcgtcctcgacatgctgatcaaccgcgtcatggatgtcgac
ggtgtacgcattgccaagccaggggagtttagtgagcaggcctttatgaatgacaagctg
gatctcacccaggcagaggccattgccgatctgattgacgctaccagcgaacaagccgcc
aagagcgccctcaattcacttcagggcgagttttccacccaggtacatgagctggtggat
caggtcaccaatttgcgtctctacgtggaagccgcgatagactttcctgacgaggaggtc
gattttctctccgacggtaaaattgccgcttcacttagcaagatcatccataaattagat
tcggtacagtccagtgccaagcagggcgccattattcgcgaaggaatgaaggtggtgatt
gccggtcgccctaacgcaggaaaatccagcctgctcaatgccctggccggtaaagaatca
gccattgtcaccgagatagccggtaccactcgcgacgtgttacgtgagcatattcacctc
gatggcatgccgctgcacatcatagatacggctggcctacgcgacaccactgacacagtt
gagcagataggtatcgaacgggcctgggcagagatagaaaccgccgatcaggtactcttc
atggttgatggcaccaccacagatgctgtcgatccccatgatatctggccagattttatc
gatcgtctcccaaaaaatctgggggttaccgtggtgcgcaacaaggcagatcttactgga
gaagccttagatgccacagatgaacagggccacaaggtgtttcgtttgtcagccaagaca
ggctcgggtgtcgatgaactcaaggcacaccttaagtcgctaatgggatatcagagtaat
ttagaaggcggctttattgcccgtcgtcgccatctcgaggcactggaactcgctgcgagt
catctcaccttgggacaggaacagttagaggtgtatcaagcgggtgagctcctggcagag
gagttgcgtatgtgtcaactcgccttatcagaaatcacgggtaagttcacttcagatgat
ctactaggcaagatttttggctccttctgtatcggcaaataa
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