Sphingopyxis macrogoltabida 203: LH19_23540
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Entry
LH19_23540 CDS
T04627
Name
(GenBank) RNA polymerase sigma70
KO
K02405
RNA polymerase sigma factor FliA
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz02020
Two-component system
smaz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LH19_23540
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LH19_23540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smaz03021
]
LH19_23540
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
smaz02035
]
LH19_23540
Transcription machinery [BR:
smaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LH19_23540
Bacterial motility proteins [BR:
smaz02035
]
Flagellar system
Flagellar assembly proteins
Stator
LH19_23540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Anticodon_2
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ALJ15861
UniProt:
A0A0P0DVH3
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All DBs
Position
4769491..4770264
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AA seq
257 aa
AA seq
DB search
MRIEPAGQFAGATGPREYAAAAGGTLRPRGYPDSVERLVDEYAPLVRKIAWQVFSRVSRT
SELDDLIQTGLIALIEASRHYEERGFAFATYASTRIRGAMIDQLRREADVGRSAMVANKR
LKTVRATLEQHLMRAPTAAEMAEAFDMSAEEYFALERSAMQGRSTSLDELTESGSFLIAD
DRPGAETLYEEEDVLDALRQCIDRLSEREQMVLQLYFFEELNLQEIGLTLDVSAARICQI
KRDAMAKVNAMMVEMTE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgagcccgcggggcagttcgccggcgccaccggcccgagggaatatgccgcc
gccgccggcgggacgctgcgcccgcgcggctatcccgacagcgtcgaacggctggtcgac
gaatatgcgccgctggtgcgcaagatcgcctggcaggtgttctcgcgggtgtcgcggacg
agcgaactcgacgacctcatccagacgggactgatcgcgctcatcgaggcgagtcgccac
tatgaggaacgcggcttcgcctttgccacctatgcctcgacccgcattcgcggcgcgatg
atcgaccagctccgccgcgaagccgacgtcggccgctcggcgatggtggcgaacaagcgg
ttgaagacggtccgcgcgacgctcgaacagcatctgatgcgcgcgccgacggccgccgag
atggccgaggcgttcgacatgtcggccgaagaatatttcgcgctcgaacgcagcgcgatg
caaggccgctcgacctcgctcgacgagctgaccgaaagcggcagcttcctgatcgccgac
gaccggccgggcgccgaaacattatatgaggaagaggatgtgctggatgcgctgcgccag
tgcatcgaccggctgtcggagcgcgagcaaatggtgctccagctctatttcttcgaggaa
ctgaatttgcaggagatcggcctgaccctcgacgtcagcgctgcccgcatctgccagatc
aagcgcgacgcaatggcgaaggttaatgcgatgatggtggaaatgaccgaatag
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