KEGG   Sphingopyxis macrogoltabida 203: LH19_23540
Entry
LH19_23540        CDS       T04627                                 
Name
(GenBank) RNA polymerase sigma70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
smaz  Sphingopyxis macrogoltabida 203
Pathway
smaz02020  Two-component system
smaz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:smaz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LH19_23540
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LH19_23540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smaz03021]
    LH19_23540
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:smaz02035]
    LH19_23540
Transcription machinery [BR:smaz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LH19_23540
Bacterial motility proteins [BR:smaz02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    LH19_23540
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 Anticodon_2 UPF0122
Other DBs
NCBI-ProteinID: ALJ15861
UniProt: A0A0P0DVH3
LinkDB
Position
4769491..4770264
AA seq 257 aa
MRIEPAGQFAGATGPREYAAAAGGTLRPRGYPDSVERLVDEYAPLVRKIAWQVFSRVSRT
SELDDLIQTGLIALIEASRHYEERGFAFATYASTRIRGAMIDQLRREADVGRSAMVANKR
LKTVRATLEQHLMRAPTAAEMAEAFDMSAEEYFALERSAMQGRSTSLDELTESGSFLIAD
DRPGAETLYEEEDVLDALRQCIDRLSEREQMVLQLYFFEELNLQEIGLTLDVSAARICQI
KRDAMAKVNAMMVEMTE
NT seq 774 nt   +upstreamnt  +downstreamnt
atgagaattgagcccgcggggcagttcgccggcgccaccggcccgagggaatatgccgcc
gccgccggcgggacgctgcgcccgcgcggctatcccgacagcgtcgaacggctggtcgac
gaatatgcgccgctggtgcgcaagatcgcctggcaggtgttctcgcgggtgtcgcggacg
agcgaactcgacgacctcatccagacgggactgatcgcgctcatcgaggcgagtcgccac
tatgaggaacgcggcttcgcctttgccacctatgcctcgacccgcattcgcggcgcgatg
atcgaccagctccgccgcgaagccgacgtcggccgctcggcgatggtggcgaacaagcgg
ttgaagacggtccgcgcgacgctcgaacagcatctgatgcgcgcgccgacggccgccgag
atggccgaggcgttcgacatgtcggccgaagaatatttcgcgctcgaacgcagcgcgatg
caaggccgctcgacctcgctcgacgagctgaccgaaagcggcagcttcctgatcgccgac
gaccggccgggcgccgaaacattatatgaggaagaggatgtgctggatgcgctgcgccag
tgcatcgaccggctgtcggagcgcgagcaaatggtgctccagctctatttcttcgaggaa
ctgaatttgcaggagatcggcctgaccctcgacgtcagcgctgcccgcatctgccagatc
aagcgcgacgcaatggcgaaggttaatgcgatgatggtggaaatgaccgaatag

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