Sinorhizobium medicae: Smed_1182
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Entry
Smed_1182 CDS
T00555
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00260
Glycine, serine and threonine metabolism
smd00630
Glyoxylate and dicarboxylate metabolism
smd00785
Lipoic acid metabolism
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
smd01200
Carbon metabolism
Module
smd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Smed_1182
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Smed_1182
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Smed_1182
Enzymes [BR:
smd01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Smed_1182
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ABR60033
UniProt:
A6U8Q3
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All DBs
Position
complement(1260884..1263748)
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AA seq
954 aa
AA seq
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MSMPKDFTFTDYKPYDFANRRHIGPSPAEMDEMLKVVGYPSLDALIDDTVPPSIRQQTPL
AWGAPMTEREALDKLRETANRNRKVVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNFQTMVCDLTGLDVANASLLDEATAAAEAMAIAERVAKSKAKAFFVDE
NCHPQTIALLKTRAEPLGWQIVVGNPFEDLDAAIVFGAIFQYPGTYGHVRDFSGLIARLH
ELGAIAAVAADPLALALLKSPGEMGADIAVGSTQRFGVPVGYGGPHAAYMAVRDAYKRSM
PGRLVGVSVDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVFHGPEGI
KAIAQSVHQKTVRLALGLEKLGYTVEPDVFFDTITVEVGKLQGIILKAAVAEDVNLRKIG
TTKIGISLDERSRPITLEAVWRAFGGDFSVDQFEPDYRLPKELLRTSDYLTHPIFHMNRA
ESEMTRYMRRLADRDLALDRAMIPLGSCTMKLNATAEMLPITWPEFSEIHPFVPADQAMG
YHHLIEDLSQKLCAITGYDAISMQPNSGAQGEYAGLLAIRAYHIANGNEHRDVCLIPTSA
HGTNPASAQMAGMKVVVVKVSDAGEIAMDDFRAKAEQYAETLSCCMITYPSTHGVFEENV
REVCEIVHKHGGQVYLDGANMNAMVGLSRPGDIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKAHLAPFLPGHPESGEHKGAVSAAPFGSASILPISWSYCLMMGGEGLTQATKVAILNA
NYVAARLKGAFDVLYKSAKGRVAHECIIDTRPLAESAGVTVDDVAKRLIDCGFHAPTMSW
PVAGTLMIEPTESETKAELDRFCDALLAIREEARAIAEGRMDKINNPLKNAPHTVEDLVG
DWDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLVCTCPPIESYAEAAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcccaaggactttacctttaccgactacaagccctacgacttcgccaatcgc
cgtcacatcggcccctcgccggccgaaatggacgaaatgctgaaggtcgtcggctatccg
agcctcgatgcgctcatcgacgacaccgttccgccgtcgatccggcagcagactccactc
gcctggggtgcgccgatgacggaacgcgaggcgctcgacaagctgcgcgagacggcgaac
cgcaaccggaaggtcgtttctctgatcggccagggctattacggaaccatcacgcccccg
gtcatccagcgtaatattctcgagaatcccgcctggtacaccgcctatacgccctatcag
ccggagatcagccaggggcgtctcgaagccctgctcaattttcagacgatggtttgcgac
ctgaccggacttgacgtcgcaaacgcctcgctgctggacgaggcgacggcggcggcggaa
gcgatggccattgcggagcgcgtcgcaaagtccaaagcgaaggcctttttcgtcgacgag
aactgccacccccagacgatcgcactgttgaagacccgggcagagccgctcggctggcag
atcgtcgtcggcaatcccttcgaggatctggacgccgcaatcgttttcggcgcgattttc
cagtatcccggcacttatggtcatgttcgcgatttctcgggcctgatcgccaggctccac
gaactgggcgcaatcgccgccgtcgcagccgatccgctggcgctggcgcttttgaagtcg
ccgggtgagatgggcgcagacatcgccgtcggctcaacccagcgcttcggcgttccggtg
ggctatggcgggccgcacgccgcctacatggcggtcagggacgcctacaagcgctcgatg
cccggccgtctcgtgggcgtgtcggtcgacgcgcgcggaaaccgcgcctatcggctttcg
ctgcagacgcgggagcagcatatacggcgcgaaaaggcgacatccaacatctgtaccgcg
caggtgctgcttgccgtcatggcctccatgtatgccgtcttccacgggcccgagggcatc
aaggcgatcgcccagagcgtccaccagaagacggtccgccttgcgctcggcctcgaaaaa
ctcggctataccgtcgagccggacgtcttcttcgatacgatcaccgtcgaggtcggcaaa
ctacaaggcatcatcctcaaggctgccgtcgccgaggacgtgaaccttcgcaagatcggg
acgacgaagatcggcatcagtctcgacgagcgctcccggccaatcaccctcgaggccgtc
tggcgggctttcggcggcgatttcagcgtcgatcagttcgagccggactaccgcctgccg
aaggaattgctgcgcaccagcgactatctcacccatccgatcttccacatgaaccgggct
gaaagcgagatgacgcgttacatgcgacgcctcgccgatcgcgatcttgcgctcgatcgg
gcaatgatcccgctcggctcctgcacgatgaagctcaacgcgacggcggagatgctgcca
ataacctggccggaattctcggagatccacccgttcgtgcccgccgaccaggcgatggga
tatcaccatctgatcgaagacctgtcgcagaaactctgcgcgatcaccggctacgacgcg
atctccatgcagccgaactcgggcgcccagggcgaatatgcaggtctgctcgctatccgc
gcctaccatattgccaatggcaacgaacatcgtgacgtctgcctgatcccgacttcggcg
cacggcaccaatcccgcctcggcgcagatggccggcatgaaggtggtggtcgtcaaggtg
agcgacgccggcgagatcgccatggacgacttccgcgccaaagccgagcaatatgcggaa
acgctctcctgctgcatgatcacctatccctcgacccacggcgtattcgaggagaacgtg
cgcgaggtctgcgagatcgtccataagcatggcggccaagtctacctggacggcgccaac
atgaatgcgatggtcggcctttcccgtcccggcgatatcggctcggatgtcagccacttg
aacctgcacaagaccttctgcattccgcatggcggcggcgggcccggcatgggtccgatc
ggggtcaaagcccacctcgcacccttccttccggggcatccggaaagcggcgaacataag
ggcgccgtttccgccgcaccgttcgggtcggcttcgatcctgcctatctcctggagctat
tgcctgatgatgggcggcgaaggcctgacgcaagcgaccaaggtggcgatcctcaatgcc
aattatgtcgccgcccggctgaagggtgcctttgacgtgctctacaagtcggccaaaggc
cgcgttgcgcatgaatgcatcatcgatacccgcccccttgccgagagcgccggtgtgacc
gttgacgacgttgccaaacggctgatcgactgcggtttccatgcgccgacgatgagctgg
ccggttgccggaaccttgatgatagagccgacggaatcggagaccaaggccgagctcgac
cgcttctgcgatgccttgctggcgatccgagaggaagcccgcgccatagcggaaggccgg
atggacaagatcaacaatccgctgaagaacgccccgcatacggtcgaggacctcgtcggc
gactgggaccggccctattcgcgcgagcaagcctgcttcccgcccggcgcattccgcgtc
gacaaatattggtcgccggtcaaccgcgtcgacaatgtctatggcgaccgcaatctcgtc
tgcacctgcccgccgatcgaaagctatgcggaagctgctgaatga
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