Sinorhizobium medicae: Smed_3534
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Entry
Smed_3534 CDS
T00555
Name
(GenBank) domain of unknown function DUF1730
KO
K18979
epoxyqueuosine reductase [EC:
1.17.99.6
]
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smd03016
]
Smed_3534
Enzymes [BR:
smd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.99 With unknown physiological acceptors
1.17.99.6 epoxyqueuosine reductase
Smed_3534
Transfer RNA biogenesis [BR:
smd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Smed_3534
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_16
QueG_DUF1730
HEAT_2
Fer4_9
Fer4_10
Fer4_7
HEAT_EZ
HEAT
Fer4_21
Fer4
Fer4_2
Fer4_8
Fer4_6
Fer4_3
Arm
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
ABR62350
UniProt:
A6UFC0
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Position
complement(3741913..3743076)
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AA seq
387 aa
AA seq
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MPGNAAEAEIQGRKRRTLTAFLKEEAAAKGFDICRITHPDAIPQAPERLRQFLADGCHGT
MEWLAETEERRSDPRVLWGDVRSITLFGMNYAPEDDPRDVLAKRDRGAISVYARNRDYHD
VVKGRLKDIATRFAARAGEDVKVFVDTAPVMEKPLAEKAGIGWQGKHTNLVSREFGSWLF
LGSLFTTAELELDEPERDHCGSCRACLDACPTDAFPAPYRIDARRCISYLTIEHKGPIAP
EYRPLIGNRIYGCDDCLAACPWNKFARSASEMKLKARNDLREPELSFLLTLDDAAFRTFF
SGSPVKRIGRDRFVRNALIAAGNSGEKSLIPVCKLLAADPSPTVRGMAVWALSRLTSTAD
LADFGRQCEAENDDAVLSEWKMAGVSL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcaacgccgcagaagcggagatccagggcaggaaacgacggaccctcaccgcc
ttcctgaaggaggaagctgcggccaaggggtttgacatctgtcgcatcacgcatccggac
gccatcccgcaagcgccggagcggctgaggcagttcctggccgatggctgccacggcacg
atggagtggcttgccgaaaccgaggagcgccgatccgacccgcgcgttctctggggggat
gtgcgctccattaccctcttcggcatgaattacgctcctgaggacgacccgcgcgatgtc
cttgccaagcgcgaccgcggcgcgatctccgtctacgcccggaaccgagattatcacgac
gtggtcaagggccggctcaaagacatcgcaacgcgtttcgccgcccgtgcgggcgaggac
gtaaaggtcttcgtcgataccgcaccggtcatggagaagccgctcgcggaaaaggccggg
ataggctggcagggcaagcacaccaacctggtcagccgcgagttcggctcctggctgttt
ctcggcagccttttcacgaccgccgaactggaactggacgagcccgaacgcgaccattgc
ggttcctgccgggcctgcctcgacgcctgtccgaccgatgcctttccagcgccctaccga
atcgatgcgcgacgctgcatctcttatctcacgatcgagcacaagggaccgattgcgccg
gagtaccggccgctgatcggcaaccgcatctatggctgcgacgattgtctcgcggcctgt
ccctggaacaagttcgcgcgctcggcatcggagatgaagctgaaggcgcggaacgatctt
agggaaccggagctctcgtttctgctgaccctggatgacgcagctttccggaccttcttt
tccggatctcccgtcaagcgcatcgggcgcgaccggttcgtccggaatgccttgatcgcc
gctggcaattccggcgaaaagagcctgataccggtctgcaagttgctggcggcggacccc
tcgccgaccgtcagaggcatggcggtctgggcgctttcgcggctgacttcaaccgctgat
ctggcggacttcggccggcaatgcgaagctgaaaatgatgacgcggttctttcggaatgg
aaaatggcgggagtgagcctatga
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