Streptococcus merionis: SAMEA4412692_2203
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Entry
SAMEA4412692_2203 CDS
T07119
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
smen
Streptococcus merionis
Pathway
smen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAMEA4412692_2203 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smen03021
]
SAMEA4412692_2203 (rpoB)
03400 DNA repair and recombination proteins [BR:
smen03400
]
SAMEA4412692_2203 (rpoB)
Enzymes [BR:
smen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAMEA4412692_2203 (rpoB)
Transcription machinery [BR:
smen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAMEA4412692_2203 (rpoB)
DNA repair and recombination proteins [BR:
smen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAMEA4412692_2203 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
SNU91188
UniProt:
A0A239T271
LinkDB
All DBs
Position
1:2344702..2348286
Genome browser
AA seq
1194 aa
AA seq
DB search
MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSYKEFLERELKEVFEDVLPVSNFTD
TMELEFVGYEMREPKYTLEEARLHDASYSAPIYVTFRLINKETGEIKTQEVFFGDFPLMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGTTVIPNRGAWLELESDSKDIG
YARIDRTRKIPFTTLVRALGFSGDDEIFDIFGDSDIVRNTIEKDLHKNLSDSRTDEALKE
IYERLRPGEPKTADSSRSLLTARFFDSRRYDLAAVGRYKINKKLSLKTRLLNQTIAESLV
DPETGEILVESGTVLTRQVIDSIAEHLDGDLNKITYIPNDSAVLTDPVELQRFKIVAPTD
PDRVIHVIGNANPDERKRTITPADILASMNYFLNLAEGLGRVDDIDHLGNRRIRAVGELL
ANQVRIGLTRMERNLRERMSSQDNEVLTPQSIINIRPVTAAVKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYGH
LNKYGFIQTPYRKIDPETRQVTDEIVWLTADEEDEFIVAQANSPLKEDRTFATEIVMGRH
QGNNQEFPADQADFMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAP
YVGTGMEYQAAHDSGAAVIAQHEGTVTYADADKVEVRREDGSLDIYTVTKFRRSNSGTAY
NQRTLVKVGDKVEKGDFIADGPSMERGEMALGQNPIVAYMTWEGYNFEDAVIMSERLVKD
DVYTSVHLEEYESETRDTKLGPEEITREIPNVGEEALRQLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGADGVVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWSTVKEAGMDSDAKTVLYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDVTGRLKAYEAITKGNPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDNEVELRDLDEGEDDDIIHVDDLEKARQKAAAEAAAAFEAEESEDKTADS
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgaagttcagtacggcaaacaccgtacccgtcgtagcttttcaagaatc
aaagaggttcttgatttaccaaacttgattgaaatccagactgattcatataaggaattt
ctggagcgtgaactgaaagaagtctttgaagatgttcttccagtatcgaacttcacagac
accatggaactggagtttgtggggtatgaaatgcgtgagcctaagtataccttagaagaa
gcgcgtcttcacgatgcctcttactcagcaccgatctatgtcaccttccgtctgattaat
aaggagacaggtgaaattaagactcaggaagtcttcttcggtgatttcccactcatgact
gagatgggaactttcatcatcaatggtggtgagaggattatcgtttctcagctggtgcgt
tcacctggtgtttacttcaatgataaggttgataaaaacggtaaggttggttatgggaca
acagtaattcctaaccgtggtgcttggttggagttggagagcgattccaaagacatcggt
tatgcccgtattgaccgtacccgtaagattccgtttacaacccttgtgcgcgcccttggt
ttctcaggtgatgatgaaatctttgatattttcggagatagtgatattgtccgtaacact
atcgaaaaagacttgcataaaaatctgtctgactcacgcacagatgaagctcttaaggaa
atctatgagcgtcttcgtccaggggaacctaagactgcagactcttcacgtagcttgttg
acagcgcgtttctttgactctcgccgttacgacttggctgcggttggtcgttacaagatt
aataaaaagctaagcctcaagactcgtcttttgaaccagacgattgcagaatcattggtt
gatcctgaaacaggggaaattttggtggagtctggaacggtcttgacgcgtcaagtcatt
gactcgatcgcagagcacttggatggtgatctgaataaaatcacctatattcccaacgat
tctgctgttttgacagatcctgttgaattgcaacgcttcaagattgtggcgccaacggat
cctgatcgcgttatccatgtcattgggaatgccaatccagatgagcgcaaacgtactatt
acaccagctgacatcttggcttctatgaactacttcctcaacttggcagaaggtctgggc
cgtgtcgatgatattgatcacttggggaatcgtcgtattcgtgctgttggagagctttta
gctaatcaagtacggatcggtttgacgcgcatggagcgaaatctgcgagagcgcatgtct
tctcaggacaatgaagttttgacaccgcaaagcattattaatatccgtccagtaactgcc
gcagtgaaagagttctttggttcttctcagttatcacagttcatggatcagcacaatccg
ctttctgagctttcacataaacgccgtttgtcagccttagggcctggtggtttgacccgt
gaccgtgctggttatgaagtgcgggacgtgcattacactcactatggtcgtatgtgtccg
attgaaacgcctgaaggaccaaacattggtctgatcaataacttgtcgtcttacggacac
cttaacaagtacggctttatccaaacaccgtatcgtaagattgacccagaaacccgtcaa
gtgacagatgaaattgtttggttgacagcggacgaagaagatgagtttatcgtagctcag
gctaactcaccacttaaggaagaccgcacatttgccactgaaattgttatggggcgtcat
caagggaacaaccaagaatttccagctgaccaagcggatttcatggacgtatctcctaag
caggtagttgccgttgcaacagcgtgtattccgttcttggaaaacgatgactccaaccgt
gccctcatgggtgctaacatgcaacgtcaggctgtgccgctcattgatccgaaagcgcct
tatgttggtactggtatggagtatcaagcagcccacgattcaggtgcagcggtgattgct
cagcatgaaggtactgttacttacgccgatgccgataaggtagaagtgcgtcgcgaagat
ggctcactcgacatttacaccgtaacgaaattccgtcggtcgaactcaggtacagcctac
aatcaacgcacacttgttaaagttggcgataaggttgaaaaaggcgatttcattgcggat
ggtccttctatggaacgtggcgaaatggcccttggtcaaaaccctattgttgcttacatg
acttgggaagggtataacttcgaggatgcggttatcatgagtgagcgcttggtcaaggac
gatgtttacacctccgttcacttggaagagtacgaatcagaaacccgcgataccaagtta
ggccctgaagaaattacgcgtgaaattccaaacgttggtgaagaagcccttcgtcagctg
gatgagatggggattatccgcatcggtgcagaggttaaggaaggtgacattcttgttggt
aaggtgacacctaaaggtgaaaaagacctttctgcagaagagcgtctcttgcacgccatc
tttggtgataagtcacgcgaagttcgtgatacttcgttgcgcgtgcctcacggtgctgac
ggtgtcgttcgagatgtgaaaatctttacccgcgctaacggagacgaacttcaatctggc
gtcaacatgctggttcgtgtctatattgctcaaaaacggaagatcaaggtcggagataag
atggccggtcgtcacgggaacaagggtgtcgtatcgcgtatcgttcctgtagaagacatg
ccgtacttaccagacggtacaccagttgatatcatgctcaacccactcggggtaccatca
cgtatgaatatcggtcaagttatggagcttcacttaggtatggcagctcgcaacttgggc
atccacatcgcaacaccagtctttgatggcgcaagttcagaagatttatggtcaacggtg
aaggaagccggtatggactcagatgccaagactgtcctttatgatggccgtacaggtgag
ccatttgacaaccgcgtttctgttggtgtcatgtacatgattaagctgcaccacatggtt
gatgacaagcttcatgctcgctcaacagggccttactcactcgttacccaacagccactc
ggaggtaaagctcagtttggtggacagcgtttcggtgagatggaagtttgggctcttgaa
gcctacggagcatctaatgtcttgcaagaaattttgacctacaagtcagatgatgtaaca
ggtcgtctcaaggcttatgaagctatcacaaaaggcaatccgattccaaaacctggtgtc
ccagaatcgttccgcgttcttgtgaaagaattgcagtcgctcggtcttgacatgcgtgtc
cttgacgaagatgacaatgaagtagaactccgtgacttggatgaaggtgaagatgacgat
attatccacgttgatgatcttgaaaaggcgcgtcaaaaagctgcggcagaagcagctgca
gcctttgaagcagaagaatctgaagataaaactgcggattcctaa
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