Silurus meridionalis (southern catfish): 124380134
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Entry
124380134 CDS
T08004
Symbol
vegfd
Name
(RefSeq) vascular endothelial growth factor D isoform X1
KO
K05449
vascular endothelial growth factor C/D
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
smeo04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124380134 (vegfd)
04020 Calcium signaling pathway
124380134 (vegfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124380134 (vegfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124380134 (vegfd)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Growth factors (RTK binding)
124380134 (vegfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
Motif
Other DBs
NCBI-GeneID:
124380134
NCBI-ProteinID:
XP_046696866
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All DBs
Position
26:complement(16370400..16388980)
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AA seq
299 aa
AA seq
DB search
MRTLLSIWLHVLLLAYVRLLLLATDVLASIRDINQEKWEKDIRSAASLDELLMLTDFPDW
KLWRCRLKLKHIDSAAFPEFRSASVGSHRFTRFAANSYSLEVLKAIDEEWQKTQCMPRET
CVDAAQELGTNNDMFFKPPCVSVYRCSGCCNKEGVTCRNTSTTYVDKILLSVVPFKYGPE
PMLIRVANHTECRCQEPQMIRRHALPHRKNGCFPIRQSEESRRLCERGLIWDCMEDRCVP
YPASKQEIPTKANSEDCEIDVEKCECIPKEATSTRKNPSCPCAARRKQFNHTSCSCKRT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcggactctgctttccatttggcttcacgtgctgctgcttgcatatgtcagactactg
ctgcttgcgacggatgtcctggcttccatcagagacataaaccaggagaagtgggagaag
gacatcaggtcagctgctagcctggatgagctgctcatgttgaccgactttccagactgg
aagctgtggaggtgtcgtctaaagctgaagcacatcgactcggccgctttcccagaattc
cgttcggcctcagtgggatcgcacagattcacacgctttgctgccaactcttacagtctg
gaggtactcaaagccattgatgaagagtggcagaaaacgcagtgcatgccccgggagact
tgcgtggatgcggctcaggagctcggcaccaacaacgacatgttcttcaagccgccgtgt
gtctccgtgtacagatgtagcggctgctgcaacaaagaaggcgtcacgtgccgcaacacg
agcaccacctacgtcgacaaaatacttttgagcgtggtgccgtttaaatacgggcctgag
ccgatgctgatcagggttgccaaccacacagagtgtagatgccaggaaccgcagatgatt
cgcagacatgctctgccccacaggaagaatgggtgttttcccattcgccagtcggaagaa
tccagacgactatgtgagcgagggctcatatgggattgcatggaggatcggtgtgtgcct
tatcctgctagcaaacaagaaattcccaccaaagcaaattcagaggattgtgaaattgac
gtggaaaaatgcgaatgtattcccaaagaggcaacatcgacccggaaaaacccttcatgc
ccgtgcgcagccaggaggaagcaattcaaccatacgtcgtgcagctgcaaaagaacgtga
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