Silurus meridionalis (southern catfish): 124381988
Help
Entry
124381988 CDS
T08004
Symbol
pals2b
Name
(RefSeq) LOW QUALITY PROTEIN: MAGUK p55 subfamily member 6b
KO
K28619
MAGUK p55 subfamily member 6
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124381988 (pals2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124381988 (pals2b)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
PDZ domain-containing proteins
MAGUK family proteins
124381988 (pals2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27
PDZ
SH3_1
SH3_2
PDZ_2
PDZ_6
PDZ_Tricorn
SH3_9
Motif
Other DBs
NCBI-GeneID:
124381988
NCBI-ProteinID:
XP_046699974
LinkDB
All DBs
Position
29:complement(4478716..4521363)
Genome browser
AA seq
539 aa
AA seq
DB search
MQQVLGNLKDLSTSTKASDLDLLFLKGIMESPVFCSLAQVHENLEDLKLEAVQDNNVELV
SEILGIIRGLTIADNSAAELSRILRQPHFQSLLEAHDMVASKCYQAPPPIDPAIATAANN
ALMQPNAVRMIGIHKRAGESLGVTFRVEKEALVITRILYGGLIDRQGLLHVGDIIKEVNG
QQVGNNPTELQKILKDCSGGITFKILPSYIDSAIPPWVYVKPHFDYNPANDILIPCREAG
LTFKKGDVLQIVNREDLNWWQACNKVEGTTGLIPSQLLEEKRKAFVPKNLDTTGILCGTL
NSKMKKKKMYITSRNAEFDHHELQVYEEVACVPPFQRRTVVLIGAKGVGRRSLKKSLLVC
HPDRYGTTVPFTSRRPREDEHNGQTYQFVTRKDMELGIKLGYFLEHGEYDGNLYGTKISS
IHEVVDXGRTCILDVNPQALKVLRTAEFMPYVVFIATPELETLKVIHKAVVDAGILTKQL
TDVDLKKRVDESAYIQQTFQHYFDLTIVNDNFHAALETLQAALDRLYSEPQWVPVNWVY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagtgttgggtaacctgaaggatttgtcaacctccactaaggccagtgatctc
gacctccttttcctcaaaggcattatggaaagccctgtgttctgctctcttgcccaggtt
catgagaatttagaggatttgaagttggaggcagtgcaggataataacgttgaacttgtg
agtgagattctagggataattcgtggtctgaccattgcagacaacagtgctgcagagtta
tcaagaatacttcggcagcctcacttccagtctctcctggaggcccatgatatggttgca
tcaaaatgctatcaggctcctcctcccatcgatccagccattgcgacagcagccaacaat
gcactcatgcaacccaatgctgttagaatgatcggcattcacaaaagagcaggagaatct
ttgggcgtcacattccgggtggagaaggaagcccttgtgatcactcgaattctctacggt
ggattgattgacaggcaggggctactccatgttggtgatatcataaaggaagtgaatggg
cagcaggtgggcaacaacccaactgagctacagaagatactgaaggactgcagtggagga
atcacttttaaaatccttcctagctacatagattctgcaataccaccatgggtttatgta
aagccccattttgactacaatccagccaatgacatcctgattccatgcagagaggctggt
ctcacctttaaaaagggtgacgttcttcagatagtcaacagagaggacctgaactggtgg
caggcatgtaataaagtggaaggaactacagggttgattcccagccagttactggaggag
aaaagaaaagcttttgttccaaaaaacttggatacaacagggatcttatgtggaacacta
aacagtaaaatgaagaaaaaaaagatgtacattacttcaaggaatgcagaatttgaccat
catgagctgcaggtctatgaggaggtagcatgcgtgccaccattccagaggaggacagtg
gtactaattggggcaaagggagtgggccgccgcagcctgaaaaaaagtttgttggtatgt
catcctgaccgctatggaaccacagtaccattcacatctcgaagacctcgagaggacgag
cacaatggtcagacttaccaatttgtgacaaggaaagacatggagcttggtattaaatta
ggatatttcttggagcatggcgagtatgatggcaacctgtatggcaccaaaataagttct
attcatgaggtggtggacnacggacgcacctgcatcctggacgtcaaccctcaggctctg
aaggtgctgagaacagcagagtttatgccctatgtagtgttcatagcgactcctgagctc
gagaccctaaaagttatacacaaagcagttgttgatgcaggaatcctcaccaagcagcta
acagatgtggatctaaagaagagagtggatgaaagtgcttacattcagcagacttttcaa
cactacttcgacctcaccattgtgaatgacaactttcacgctgcattggaaacactacag
gcagctttggacagactttattctgaaccacagtgggttcctgtcaactgggtttactga
DBGET
integrated database retrieval system
