Silurus meridionalis (southern catfish): 124387228 Help Entry 124387228         CDS       T08004                                  Symbol capn1 Name (RefSeq) calpain-1 catalytic subunit   KO K01367   calpain-1 [EC:3.4.22.52] Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo04141   Protein processing in endoplasmic reticulum smeo04210   Apoptosis smeo04217   Necroptosis smeo04218   Cellular senescence smeo04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:smeo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     124387228 (capn1)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     124387228 (capn1)    04217 Necroptosis     124387228 (capn1)    04218 Cellular senescence     124387228 (capn1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     124387228 (capn1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:smeo01002]     124387228 (capn1) Enzymes [BR:smeo01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      124387228 (capn1) Peptidases and inhibitors [BR:smeo01002]  Cysteine peptidases   Family C2: calpain family    124387228 (capn1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_5 EF-hand_7 CAPN13-like_C_EFh Motif Other DBs NCBI-GeneID:  124387228 NCBI-ProteinID:  XP_046707402 LinkDB All DBs Position 6:23723535..23747610 Genome browser AA seq 704 aa AA seqDB search MEPMYASGMAAKLRSQWDRDDGLGQNHKAVKLLGQDYEMLKAQCLQSRTLFEDSYFPACA SSLGFKELGPHSSKTAGVRWMRPPELCSRPQFIMDGATRTDICQGALGDCWLLAAIASLT LNDNLLHRVVPHGQNFSDGYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLFVHSAEGGE FWSALVEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMYELNKAPSDLFNIIRRAIERG SLLGCSIDISNTRDMEAVTFKKLVKGHAYSLTAVDEVVYRGTPTKLVRIRNPWGEVEWTG AWSDNAREWDSVDSATRSRLQNRSEDGEFWMSFQEFLREFSRLEICNLTADALEVNQVKK WSTSHYQGEWRRGSTAGGCRNYPATYWLNPQFKINLKHPDTAGQDKCTFLVALMQKDRRK QRKEGKDMETIGFAIYEVPQEYAGQSGVHLKRDFFLTHGSSARSELFINLREVSTRFALP SGEYIIVPSTFEPQKEADFVLRVFSEKPAESEELDDEIKANLPKVNYLDESQIDAGFKSL FRQLAGADMEISVTELQTILNRIMKKHKDLKTDGFSQEACRSMVNLMDTDGSGKLGITEF HVLWEKIKHYLDVFRKFDVDKSGTMSSYELRLALESAGFKLTNHIFQLIVLRYTEQDLNV DFDNFVICLVRLETMFNTFYALDTDKDGSISLNFNQWITLTMFV NT seq 2115 nt NT seq  +upstreamnt  +downstreamnt atggagcctatgtatgcttcaggaatggcggccaagctgcgcagtcagtgggatcgcgat gatggcttgggccagaatcataaggctgtcaagttgttggggcaggactatgaaatgctg aaggcgcagtgcttgcagagcaggaccttatttgaggattcatacttccctgcctgcgct tcatcactaggctttaaagagctcgggccccattcctccaaaacagctggtgtgcgctgg atgaggccaccggagctctgttctcgtccccagttcataatggatggagcaactcgcaca gatatctgtcagggagcactcggtgattgttggctgctggctgctattgcatctctcaca ctgaatgataacctgctgcaccgtgtggtaccacatgggcagaatttcagcgatggatat gctggcatctttcacttccagttctggcagtttggtgagtgggttgatgtggtcatcgat gacaggctgccagttaaagatgggaagctgctgttcgtacactcggcagagggcggcgag ttctggagcgctctagtggaaaaggcctatgccaagctgaatggctgctacgaggctctg tcaggtggcagtacatcagaaggctttgaggacttcacaggtggtgtgactgagatgtat gagcttaacaaggctccttctgatctgttcaacatcataaggagggcaatagagagagga tcgctgctgggctgctccatagacatctccaatactcgtgacatggaggctgttaccttt aaaaagctggttaaaggccatgcctactcattgacagcagtggacgaggtggtttacaga ggaactccaactaaactggtgcgcatcaggaacccttggggagaggtggagtggactgga gcatggagtgataatgctagagagtgggacagcgtggactcggcaaccaggagcaggctg cagaatcgcagcgaagacggagagttctggatgtcgtttcaagagtttctgcgtgagttc agcagattggagatatgtaacctgacagcggatgctctggaggtcaatcaggtgaagaag tggagcacgtcacactatcagggcgagtggagaagaggaagcacagctggaggctgtagg aactacccagctacgtattggctcaaccctcaattcaagatcaacctgaagcacccggat acagcaggacaagacaagtgcaccttcctagtggctctgatgcagaaagaccgcaggaaa cagcgcaaagagggtaaagacatggagactattggcttcgcgatatatgaggttccccaa gagtatgcaggtcagtcaggagttcacctgaagcgagacttcttcctcacacacggctcc agcgctcgctccgagctcttcatcaacctgcgtgaggtcagcacgcgattcgcccttcct tccggagaatacatcattgtcccgtccacgttcgagccgcagaaagaggctgactttgtg ctgcgtgtcttctctgagaaacccgccgaatcagaggagctggatgatgaaatcaaagct aatcttcccaaagtgaattatttggatgagagtcaaatcgatgccgggttcaagagtctc ttcagacagctggcaggagcggacatggaaatcagcgtcacagagctccagaccattttg aacagaatcatgaagaagcataaggatctgaagacagacggcttttctcaggaggcgtgt cgcagtatggtcaacctcatggatacagatggcagcggtaagctggggatcacagagttc catgtgctgtgggaaaaaatcaaacattatctggatgtgttcaggaagtttgatgtagac aagtctggcacaatgagctcatacgagctgcgcttggctctcgaatcagccggattcaag cttaccaaccatatattccagctgattgttctgcgctatacagagcaggacctgaacgtc gactttgacaacttcgttatctgcctagtgcgtctagagaccatgttcaatacattttat gccttagacactgacaaggatggatcaatctccctaaacttcaaccagtggatcactttg accatgtttgtgtga

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