Silurus meridionalis (southern catfish): 124389236
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Entry
124389236 CDS
T08004
Symbol
nploc4
Name
(RefSeq) nuclear protein localization protein 4 homolog
KO
K14015
nuclear protein localization protein 4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124389236 (nploc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124389236 (nploc4)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
124389236 (nploc4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
124389236
NCBI-ProteinID:
XP_046710527
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Position
7:18651399..18668135
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AA seq
617 aa
AA seq
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MAENIIIRVQSPDGMKKISSTKRETSAAFLKKVAKEFGFNSNGFSLYLNRNKTGEIPSQN
KALIMFKIKHGDMLFLFPSSAGSSSENMDTAQPQSSLSSSSSSSLSRSHSALQFQEDEID
QYLAKQDGKIYRNRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLDPPVKHMSFHAYIRKL
TGGADKGKFAALENISCKIKSGCEGHSPWPEGICTKCQPSAITLNRQKYRHVDNIMFENH
TIADRFLDFWRKTGNQRMGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIGTQNSLEIIDDP
RAAAVEEIAAKLGLCKLGWIFTDLLSEDTRIGTVRYTRNKDSYYLSAEECITAGHFQNRN
PNSCRLSPDGHFGSKFVTVVATGGPDNQVHFEGYQVSNQCMALVRDECLLPCRDAPELGY
AKESSSEKYIPDVFYKDKDKFGNDITYLARPLPVEYLIIDITTTFPKDPVFTFSSTLRFS
IENRESLGETQDFHSLATYLSQSTSSSSFLNIVSDFHLLVFLVTNDVMSLRDSIGLLLDA
VKTSNEELAQTWKKSEQWATIEQLCSTVGGQQGGSLDYAMGGPSIPASSSAMWSCLHCTF
MNQPGTEHCEMCSLPRS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaacatcatcattcgtgtccagtctccagacgggatgaagaaaatcagttca
accaagcgtgagacttctgcagcttttctgaagaaggttgctaaagagtttggttttaac
tcgaatgggttttctctctacctgaaccgcaataaaacaggcgagattccatctcagaac
aaggcccttatcatgtttaaaatcaagcatggagacatgctctttctcttcccatcatcg
gccggttcctccagtgagaacatggacacagcacagcctcagtcttcattgtcgtcttct
tcctcctcctccttgtctcgttcacactctgcgctacagttccaagaggacgagattgat
cagtatctggccaagcaagacggcaagatatacagaaacagggatccccagctatgccgg
catggtcccttggggaaatgtgttcactgtgtacccttagagccgtttgatgaagactac
ctgaatcatctcgacccacctgttaaacacatgtcgttccacgcctacatccgcaagctg
acaggtggagcagacaaaggcaagtttgcagcactggagaacatcagctgtaagatcaag
tcaggctgtgagggccattcgccctggcctgagggcatctgcactaagtgccagcccagt
gctatcaccctcaacagacagaaatacagacatgtcgataacatcatgtttgagaaccac
accatcgcagaccgcttcttggacttttggaggaagacaggaaatcagcggatgggatat
ctgtatggccgctacacagagcataaagatattccactgggaatccgtgctgaggtggcc
gctatttatgaacctccacagattggtactcagaacagtctggagattattgatgacccc
agagctgcagcagtggaagagatcgctgctaaactgggcctctgtaaactggggtggatc
tttacagacctattgtctgaggatacaagaataggcacagtgcggtacacgagaaacaag
gactcttactatttgagcgcagaggagtgtatcacggccggacatttccagaaccgcaac
cccaattcatgccggctctctcccgatggccactttggatcaaaatttgtcacagtggtt
gcaaccggtggtcctgataaccaggtacattttgagggctaccaagtttctaaccagtgc
atggccttggtgagagacgagtgcctgctgccctgcagagatgcccctgaactcggctac
gccaaagagtcaagcagtgagaaatacatccctgacgtcttctataaggataaagataaa
tttggaaacgacatcacttacttggcccgtcctctaccagtggagtacctaattattgac
atcaccaccacttttcctaaagaccccgtgttcaccttttcctccacgcttcgcttctcc
attgagaacagagagtcattgggagaaacacaggacttccacagtttagctacatatctc
tcccagagcacttcctcctcatcttttttgaacatcgtttctgacttccacctgctcgtc
tttctagtcactaatgacgtcatgtctttgcgagacagtattgggttgttactggatgca
gtgaaaacctcaaatgaggagctggcacagacctggaagaaatctgagcagtgggctaca
atcgagcaactctgtagcacagtaggagggcagcagggaggctctcttgactatgctatg
ggtggcccatctatcccagcatcctcctctgccatgtggtcctgcctccactgcaccttc
atgaaccagccaggcacggagcactgcgagatgtgcagcctgccccgtagttaa
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