Silurus meridionalis (southern catfish): 124389765
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Entry
124389765 CDS
T08004
Symbol
slc8a1b
Name
(RefSeq) sodium/calcium exchanger 1b isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04020
Calcium signaling pathway
smeo04260
Cardiac muscle contraction
smeo04261
Adrenergic signaling in cardiomyocytes
smeo04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
124389765 (slc8a1b)
04020 Calcium signaling pathway
124389765 (slc8a1b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
124389765 (slc8a1b)
04261 Adrenergic signaling in cardiomyocytes
124389765 (slc8a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124389765 (slc8a1b)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124389765 (slc8a1b)
Transporters [BR:
smeo02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
124389765 (slc8a1b)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Others
124389765 (slc8a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Cu-oxidase_2
CFSR
Motif
Other DBs
NCBI-GeneID:
124389765
NCBI-ProteinID:
XP_046711194
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All DBs
Position
8:complement(28924070..28989027)
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AA seq
993 aa
AA seq
DB search
MHADRRIFSAPVCVCMLGVTFFARALSSPAARVSTDPVSEAADGSFFTRGRMMRHSEVSS
FLSMGLQCLALVAVLLCNIHHVTAEKVQDHSSSDHSNKSGTCGGIVQCAPGVILPVWEPQ
NPSFGDKVARATVYFVALFYMFLGVSIIADRFMASIEVITSQEKEITIKKPNGETTTTTV
RIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFNAGDLGPSTIVGSAAFNMFVIIGICV
YVVPDGEHRKVKHLRVFFVTATWSIFAYLWLYLILAVISPGVVQVWESLLTLFFFPICVV
FAWIADRRLLFYKYVYKRYRTGKHRGMIIETEGDRPLPSKVDIEMDGKMLNSHAVDFLDG
TLTLDLDDKDLDEEEARRDMAKILKELKQKHPDKEVEQLIELANYQVLSQQQKSRAFYRC
QATRLMTGAGNILKKHAADQARKAVSMHEVRSDIGENDPISKIYFDPGSYQCLENCGTVA
VNVVRRGGDLNQTVSVEFRTEDGTANAGSDYEFTEGTVLFKPGETQKEIRVGIIDDDIFE
EDENFHIHLSNVRIVHESEETENAEANHVDTIVTLGMPSTATVTIFDDDHAGIFTFEEPV
THVSESIGLMEMKVLRTSGARGVVMVPYKTIEGTAKGGGEDFEDSHGVLEFQNDEILKTI
SVYVLDREEYNKQCSFYLVLETPQWKRRGRTDHREEVKEVEQEEAEPLTGEDEEERRIAE
MGKPTLGEHIKLEIIIEESYEFKNTVDKLIKKTNLALLVGTNSWRDQFIEAITVSAGEDD
DDEECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTDYWNGWACFVVSILMIGILTAFIGD
LASHFGCTVGLKDSVTAVVFVALGTSVPDTFASKVAAIQDQYADASIGNVTGSNAVNVFL
GIGVAWSIAAIFHQSQGREFRVEPGNLAFSVTLFTIFAFICVATLMYRRRPDIGGELGGP
RTAKVLTTMLFISLWLLYILFSSLEAYCHIKGF
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcggatagacgtattttctcggcgcccgtgtgtgtgtgtatgttgggggtgaca
ttttttgcgcgcgcactctcctcccctgcagcgcgtgtcagtacggatccggtttccgaa
gcagcagacggttcatttttcacccgtggcagaatgatgaggcattctgaggtttcctcg
ttcctctctatggggctccagtgtctcgcactagtagcagtgttgctctgcaacatccat
cacgtgacagcagagaaggttcaagaccactccagctcggaccattctaacaaatcaggg
acctgcgggggtatcgtccagtgcgcccccggagtcattctccccgtatgggagccccaa
aacccctctttcggggacaaggtggcacgggccacagtgtactttgtggcattgttttac
atgttcctcggagtttccatcatcgcagatcgtttcatggcgtccatcgaggtaataacc
tctcaagagaaagagatcaccattaagaaacccaacggagaaaccaccacaaccacggta
cgcatctggaacgaaactgtgtctaacctcaccctcatggccttgggttcctctgctcca
gagattttgctttctgtcatcgaggtttgtggtcataactttaacgccggagatcttgga
ccatccaccattgttggaagtgctgcctttaacatgtttgtgattataggaatctgcgtc
tacgtggttcctgatggggaacatcgtaaagtgaagcaccttcgcgtcttcttcgtcact
gccacctggagcatttttgcgtatctgtggctctatctgatcctggcggttatctcgcca
ggcgttgtacaagtttgggaaagcctcctcacacttttcttcttccccatctgtgtggtc
tttgcctggattgcagaccgtcgtctgctcttttacaaatacgtctacaaacgctacaga
actggaaagcatcgtgggatgatcattgagaccgaaggagatcgtcctcttccatccaaa
gtggacattgaaatggacgggaagatgctcaactctcatgctgtggattttctggatgga
actttgactctggacctggacgacaaagatctcgatgaagaggaggccagacgtgacatg
gcgaagatcctgaaggagctgaagcagaagcatccggataaagaagtggagcagctgatt
gagctcgctaattaccaggttctcagccagcagcaaaaaagtcgagctttctatcggtgc
caggcgacgcggctgatgaccggcgctgggaatattttaaagaaacacgcagcagatcag
gcgcggaaagcagtcagcatgcatgaggtgcgcagcgacatcggcgaaaacgatcccatt
tccaagatctattttgatcctggatcttatcagtgcctggagaactgtggaaccgtggcg
gtcaatgtggtgcgtcgcggtggagatctcaaccaaacggtttccgtcgaattccgcaca
gaggacgggacggccaacgcgggctcggactacgagttcaccgagggtacggtgctgttc
aagccgggagagactcagaaggagatccgcgtcggcatcatcgacgacgacatcttcgag
gaggacgagaacttccacatccacctcagcaacgtccgcatcgtccacgaaagcgaagaa
acagagaatgccgaagccaatcacgtggacaccattgttaccctcggcatgccttccacc
gccaccgtcactatattcgatgacgatcacgctggaatcttcacctttgaagaaccggtg
acgcacgtcagcgaaagtatcggcttgatggagatgaaggttctccgtacatcaggagct
cgaggtgtggttatggttccctacaagaccatagaaggcacagctaaaggaggaggagag
gattttgaggacagtcacggtgtcttggagttccagaacgacgaaatcttgaagacgatc
tcggtctatgtgctcgatcgagaggaatacaataaacagtgcagcttttatttagtgctc
gagacgccacagtggaagaggagaggacgcacagatcacagagaggaagtgaaggaggtg
gaacaggaagaggcggagcctctaacaggagaggatgaagaggagcggcgtatcgcggag
atgggcaaacccacactgggtgaacacatcaaactggagatcatcatcgaagagtcttat
gagttcaagaacactgttgataaactgattaagaagacgaacttggcgctgctggtcggc
acaaacagctggagggatcagttcatcgaggccatcacagtcagtgccggtgaggatgat
gatgatgaagagtgtggtgaggagaagctcccgtcttgttttgattacgtcatgcacttc
ctcaccgtgttttggaaggttctgtttgccttcgtcccgcccactgattactggaatggg
tgggcgtgttttgttgtgtcgatcctcatgattggcattctgacggcgtttattggagac
ctggcgtctcacttcggctgcaccgtaggactgaaggactctgtcactgctgtggtgttt
gtcgctctcgggacctcagtaccagacaccttcgcgagtaaagtggctgcgatccaggac
cagtatgctgacgcatctatcgggaatgtgacaggcagcaacgcggtgaacgtgttcctg
ggcatcggtgtggcgtggtccattgccgccattttccaccaatctcaggggcgtgaattc
cgtgtggagccgggaaacctggccttctcggtcacactcttcaccatcttcgccttcatt
tgtgtggctacactaatgtaccgccgccgacccgacattggaggcgagctgggaggcccg
aggactgccaaagtgctcacaaccatgctctttatcagcctgtggctgctctacatcctg
ttctcctcactcgaggcttactgccacatcaagggcttctaa
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