Silurus meridionalis (southern catfish): 124391234
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Entry
124391234 CDS
T08004
Symbol
ticam1
Name
(RefSeq) TIR domain-containing adapter molecule 1
KO
K05842
toll-like receptor adapter molecule 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04217
Necroptosis
smeo04620
Toll-like receptor signaling pathway
smeo04621
NOD-like receptor signaling pathway
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124391234 (ticam1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124391234 (ticam1)
04621 NOD-like receptor signaling pathway
124391234 (ticam1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124391234 (ticam1)
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Gene cluster
GFIT
Motif
Pfam:
TIR_2
Motif
Other DBs
NCBI-GeneID:
124391234
NCBI-ProteinID:
XP_046713642
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Position
9:complement(3817135..3820392)
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AA seq
513 aa
AA seq
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MAGERALVDETTLTELRANANTVVKGLSERSISEPAGCLTMGASIQPSRGTGEVVNAQKE
PPKRDNSCPSSLHSTSTSCSSYSLEISVSTAETNNSNKDFRPLPLMTPAERRICQNSEAK
PPSPLVQVPSATQSYRASDPKPLQKKEQKVESKFSQCQDKNGPSEIVTPKSPSIESHLEK
TYLSSPFDNRKVEAQPVSSSQPSNATSTQERLKHDSLSSEKLSDLSESSLRNSHLSASQG
EEDIFYAFVILHAQEDTEEALKLKSRLESISSTTGATFSEDFAVPGQSTFRCVEEAIENS
AFVMLMLTPNFNTQLNEMNADSALLNSIEKPHKSNTVIPLLPRVNGLPRDQMPLVLKTKN
PLEEMKEKTFENMVRRVLDWKKIQTQKSMWRKAQQLKKQREKQQHLREKRRYCEDIIRES
TKVCELEKEVQQLQMQQQRLPPSYTPQFHGAPRRPQSFAHMPFQSPMPSYYSDNMCHQPP
SNIHIQNAKYIMIGNNSTMTVGGGVESGDEDNF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagagagggcactggtggatgagactacgctgaccgagctccgtgccaacgct
aacactgtggtgaaaggcctctctgaaagatcgatctcagaacctgctggatgtctaact
atgggtgcctccattcagccaagcaggggaaccggcgaggtcgtaaatgctcagaaagag
ccgcctaaacgagacaatagctgcccatcctctcttcactccacctccacttcctgtagc
tcatacagtctggaaatcagtgtatccacagctgaaactaataacagtaacaaagatttt
agaccactgcctttaatgactcctgcagaaagaagaatttgtcaaaactcagaggccaag
cccccaagtcccctggtccaagttccttcagcaacacagtcatatagagcatcagatccc
aagccactccaaaaaaaggagcagaaagtggaatcaaagttcagtcagtgccaggataaa
aatggcccatctgagattgtgacacccaaaagcccaagtatagaatctcatctggagaag
acatatttgtccagcccattcgataataggaaggtagaagctcaaccagtgtcatccagc
cagccatctaatgcaacttctactcaggaacgtttgaagcatgacagcttaagttcagag
aagctctccgatctctctgaaagctctctcagaaactctcacctctctgccagccaggga
gaggaggacatcttttacgcgtttgtaatcctccatgcacaagaggacaccgaagaagca
ttaaaactcaagtccaggttagaatcgatctcctcaacgactggagcgactttctccgag
gactttgctgtgcccggccagtcgactttcaggtgtgtcgaggaggccatcgagaactcg
gccttcgtcatgctgatgcttacgccaaacttcaacactcagctgaatgagatgaacgca
gattctgcacttttgaactcgattgaaaagccacacaaaagcaacaccgtcatccctcta
ctgccccgggtcaacggtttgcctcgtgaccaaatgcccttagtgttgaagactaagaac
ccacttgaggaaatgaaggaaaagacatttgaaaatatggttcgaagggtcctggattgg
aaaaaaatacaaacccagaagtcaatgtggagaaaggcacaacagttaaagaagcagcgg
gaaaaacagcagcatttgcgggagaagagacggtactgtgaggacattattcgggagtcc
acaaaggtctgtgagttagagaaggaagtacagcaactgcaaatgcaacagcaacgcctg
ccaccttcttacacgccgcaattccacggtgctcccagaaggccacagtcgtttgctcat
atgcctttccaaagcccgatgccttcgtattatagtgacaatatgtgccaccaaccgcca
tcgaacatccacatccagaatgctaagtacatcatgatcggaaataactccaccatgact
gtaggaggaggtgtagagtctggggatgaagataacttctga
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