Silurus meridionalis (southern catfish): 124392793
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Entry
124392793 CDS
T08004
Symbol
etf1a
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124392793 (etf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124392793 (etf1a)
03012 Translation factors [BR:
smeo03012
]
124392793 (etf1a)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124392793 (etf1a)
Translation factors [BR:
smeo03012
]
Eukaryotic type
Release factors
124392793 (etf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
124392793
NCBI-ProteinID:
XP_046715959
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All DBs
Position
10:complement(16983720..16995953)
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AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRVHGAEVNGAENDEKTIYLTPEQEKDK
SHFTDKETGQEHELIECMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMEYQGEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatccgagcgcagccgacagaaacgtggaaatctggaaaattaagaagctc
atcaagagtttagaggctgctcggggtaatgggaccagtatgatttcactgatcatccct
cccaaagatcagatctccagagtcgctaagatgctggctgacgagtttggcaccgcttcc
aacatcaagagcagagtcaacagactgtcagtgctgggagcgatcacctctgtacagcag
agactcaaactgtacaacaaagttccccccaatggcctagtagtctactgtggcaccatc
gtgactgaagaaggcaaagagaagaaagtcaacattgactttgagcctttcaaacccatc
aatacctcgctctatctctgtgataacaaatttcacactgaggctctgacagcgttgttg
tctgacgacagcaagtttggatttatcgtgatcgacggtagcggcgcgctattcgggacc
ttacagggcaacaccagagaagtgctgcacaaattcacagtggaccttcccaaaaaacac
ggtcgtggaggacagtctgcactgcgttttgcacggttgagaatggagaagagacataac
tatgtgcgtaaggtggctgagacggcggtgcagctcttcgtgtcgaatgataaagtcaac
gtagcaggcttagtgttggctggttcagcagacttcaagactgaactcagccagtctgac
atgtttgacccgaggttacaggcaaaggtgcttaagctggtagacatctcttacggcggc
gagaatggttttaatcaggccatcgaactatcggccgaggtcctctccaacgtcaaattc
atccaggagaagaagctaataggtcgctattttgatgaaatcagccaggacacggggaag
tactgttttggtgtcgaagacacgctgaaggccctggagatgggagcagtggagatcctc
attgtttacgagaatctggacaccatgagatacattctacgagtacatggggctgaggtc
aacggagcagaaaacgatgagaagaccatttatttgacacctgagcaagagaaggacaag
tcgcacttcacagacaaggagacggggcaggagcacgagctgatcgagtgtatgccgctg
ctggagtggtttgctaataactataagaagtttggagccacgctggagatagtcacagac
aaaagtcaagagggttcgcagttcgtgaagggatttggaggaatcggaggtattttgcgg
tacagagtggatttccaagggatggaataccagggagaagacgacgagtttttcgatttg
gatgactactag
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