Silurus meridionalis (southern catfish): 124395735
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Entry
124395735 CDS
T08004
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124395735 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124395735 (nup93)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124395735 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TarH
Motif
Other DBs
NCBI-GeneID:
124395735
NCBI-ProteinID:
XP_046720487
LinkDB
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Position
13:12137551..12162050
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AA seq
820 aa
AA seq
DB search
MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDADIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFISEVGAPGRSSLDS
VEVAYGRQIYIFNEKIVNGHVQPNLGDLCASVADSLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRVSVEMQMAFVRQALAFLENSYKNYTMVTVFGNLHQAQLGGVPGTFQLVHSFLNI
KLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLAAAMHVVNRAQHQLGEFKTWFQEYMNSP
DRRLAPATENKVRLHYRRVLRNSADPYKRAVYCLIGKCDIADNHGEVADKTEDYLWLKLN
QVCFDEDGSSAPQDRLTLAQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAIAFL
FRVERLRSHAVHVALALYELKLLIKSSGQSAQLLSHEPGDPPMVRRLNFIRLLMLYTRKF
EATDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVASEAENKGLFEEAVKLYELGKNPDKVLELMNKLLSPVIAQVSAPQSN
KERLKNMALGIAERYRTNGTAGEKSVDSTFYLLLDLMTFFDEYHAGHIDRSYDVIERLKL
VPLSQDQVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGATAGTPGRQQRVLE
DRDSILRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgagggcttcggggagttgctgcagcaggcagagcagctggcagctgagacg
gaggctgtgtccgagctgccccacgtcgaacgcaatcttcaggagatccagcaggctgga
gagaggcttcgctctcgcaccctcacacgcacctcacaggacacagcagatgtcaaagcc
tcgattcttctgggctccagaggtctagacatctttcacatttcccagcgcctggagagt
ttgagtgctgcaacgacctttgagccactggaaccagtgaaagatgcagacattcagggc
tttttgaaaaatgagagagacaatgcactgctgtctgcgatcgaggagtctcgccgcagg
actttcctgctggcggaggaatatcatcgtgagtccatgttggtgcagtgggaacaggtg
aagcagagagtgctgcacaccctgctgggagcaggcgaggatgcactggacttcagccag
gatgtagagccgagttttataagtgaagtgggagctccaggacgcagctctctggacagt
gtggaggtggcttatgggcgacagatctacattttcaacgagaagattgtaaacggacac
gttcagcccaatctgggggacttgtgtgcatcggtagctgatagtctggatgataagaac
gtatctgacatgtggctgatggtgaagcagatgacagatgtgctccttgtgccagccaaa
gacaccctgaagagtcgtgtctctgtggagatgcagatggcttttgtccgccaggccctg
gctttcctggagaacagctataagaattacaccatggtgaccgtattcgggaacctgcac
caagctcagttaggcggagtacctggtacttttcagcttgtgcacagctttctcaacatt
aaacttcctggtccacttccaggaatgcaggatggtgaggtggagggccacccggtgtgg
gctctgatctattactgcctgcgatgtggagacttagctgcagcaatgcatgtggtgaac
cgagctcagcaccagctcggagaatttaagacctggttccaggagtatatgaacagccct
gaccgccgcctggcaccagccacggagaataaagtacgactgcattaccggcgtgtgtta
cgcaacagcgctgatccatacaagcgcgctgtctactgtctcatcggcaagtgtgacatc
gctgacaaccacggggaggtggctgataaaaccgaagattatctgtggctcaagctgaac
caggtgtgttttgatgaagacggaagcagcgctccacaggacagactcactttggcccag
ttacaaaagcaactcctggaggactacggcgaatctcatttctcagccagtcagcagccg
ttcctttacttccaggtgctgtttctgaccgcgcagttcgaagcagcgatagcgttcctc
ttccgtgtggagcgtctgcgcagtcacgccgtgcacgtggccctcgccctctacgaactt
aaactgcttatcaaatcatctggacagagcgcacagctattgagtcatgaaccaggagat
ccccccatggtccgccgactcaacttcatccgtctcctcatgctctacactcgtaaattt
gaggccacagacccacgagaggctttgcagtacttctactttctgcggaatgaaaaagac
agccaaggagagaacatgttcatgcgctgcgtcagtgagctggtcattgagagtcgtgag
ttcgacatgcttctgggaaggctagaaaaagacggaagcagaaagcctggcgtgattgac
aagtttgctggagacacacgagccatcatcaccaaagtggcctcagaggctgagaacaag
ggcctgtttgaggaagctgtcaaactctatgagttaggcaagaacccagataaagtgttg
gaattaatgaacaagttgctgagtccagtaattgcccaggtcagcgcaccacagtcgaac
aaagagagactcaagaacatggcgctgggaatcgctgaacggtaccggacgaacggtaca
gctggagagaagtccgtggatagtacgttttacttgctcctggacctcatgaccttcttt
gatgaataccacgctggccatatcgaccgctcctacgacgtaatagagaggctaaagctg
gttcctttgagccaagaccaagtagaggagagggtggcagcattcaggaacttcagtgat
gaggtcagacacaatttatccgaagtgcttcttgccactatgaacatccttttcacacaa
tacaagcgcctgaagggggcgacagcgggaactccaggcagacaacagcgtgtactggag
gaccgagactcgatactgcgcagccaggcccgagcactgattacttttgctgggatgatc
ccataccgcatggctggagacaccaatgccaggctggtacagatggaagtcttgatgaac
tag
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