Silurus meridionalis (southern catfish): 124396076
Help
Entry
124396076 CDS
T08004
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124396076 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124396076 (snrpa)
Spliceosome [BR:
smeo03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
124396076 (snrpa)
Complex B
124396076 (snrpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Eap1
xRRM
Motif
Other DBs
NCBI-GeneID:
124396076
NCBI-ProteinID:
XP_046721005
LinkDB
All DBs
Position
13:6360705..6364450
Genome browser
AA seq
279 aa
AA seq
DB search
MSAQELRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARTLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKPKTTESGV
SKKAAAAAGMAGVPAAMPGMPPMSQAPRMMPMPGQPPYMPPPGMMPPPGMGPGQMPPGAM
PPGQMMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGR
HDIAFVEFDNEVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccaggagctgcggcttaatcacactatctacatcaacaatctgaatgagaaa
atcaaaaaagatgagctgaagaagtccctgtatgccattttctcccagttcggacagatc
ctggacatcctagttgcccggactctcaaaatgcggggtcaggcctttgtgatctttaaa
gaggtgaacagtgcctccaacgcactgagatccatgcagggctttcctttttacgataaa
cccatgcgcattcagtatgccaaacaagactcggacatcatcgccaagatgaagggcacg
tatgtggaacgggaccgcaagaaagaaaagaagaagcctaagacgacagaatcgggagtt
tcgaagaaggcagccgctgctgctggcatggcgggggttcctgctgctatgcctggaatg
ccacctatgagtcaagctcctcgaatgatgccaatgccgggtcagcctccatacatgcca
ccacctggtatgatgcctcctccaggtatgggccctggacagatgccaccaggtgccatg
cctccaggtcagatgatgcctgggcagatgccaggacagatgcctcagcaggtttcggag
aacccgcctaatcacatcctgttcctcaccaacctgccagaggagaccaacgagctcatg
ctgtccatgctgttcaatcagtttccagggttcaaagaggtgcgtcttgtccccggacgg
cacgacatcgcctttgtggagtttgacaacgaagtgcaggccggtgcagccagggaagcg
ttacagggcttcaagatcacacagactaacgcaatgaagatctcgtttgccaagaaataa
DBGET
integrated database retrieval system