KEGG   Silurus meridionalis (southern catfish): 124396076
Entry
124396076         CDS       T08004                                 
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
  KO
K11091  U1 small nuclear ribonucleoprotein A
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124396076 (snrpa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smeo03041]
    124396076 (snrpa)
Spliceosome [BR:smeo03041]
 Complex A
  U1 snRNP components
   U1 snRNP specific factors
    124396076 (snrpa)
 Complex B
    124396076 (snrpa)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_5 DUF4523 Eap1 xRRM
Other DBs
NCBI-GeneID: 124396076
NCBI-ProteinID: XP_046721005
LinkDB
Position
13:6360705..6364450
AA seq 279 aa
MSAQELRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARTLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKPKTTESGV
SKKAAAAAGMAGVPAAMPGMPPMSQAPRMMPMPGQPPYMPPPGMMPPPGMGPGQMPPGAM
PPGQMMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGR
HDIAFVEFDNEVQAGAAREALQGFKITQTNAMKISFAKK
NT seq 840 nt   +upstreamnt  +downstreamnt
atgtctgcccaggagctgcggcttaatcacactatctacatcaacaatctgaatgagaaa
atcaaaaaagatgagctgaagaagtccctgtatgccattttctcccagttcggacagatc
ctggacatcctagttgcccggactctcaaaatgcggggtcaggcctttgtgatctttaaa
gaggtgaacagtgcctccaacgcactgagatccatgcagggctttcctttttacgataaa
cccatgcgcattcagtatgccaaacaagactcggacatcatcgccaagatgaagggcacg
tatgtggaacgggaccgcaagaaagaaaagaagaagcctaagacgacagaatcgggagtt
tcgaagaaggcagccgctgctgctggcatggcgggggttcctgctgctatgcctggaatg
ccacctatgagtcaagctcctcgaatgatgccaatgccgggtcagcctccatacatgcca
ccacctggtatgatgcctcctccaggtatgggccctggacagatgccaccaggtgccatg
cctccaggtcagatgatgcctgggcagatgccaggacagatgcctcagcaggtttcggag
aacccgcctaatcacatcctgttcctcaccaacctgccagaggagaccaacgagctcatg
ctgtccatgctgttcaatcagtttccagggttcaaagaggtgcgtcttgtccccggacgg
cacgacatcgcctttgtggagtttgacaacgaagtgcaggccggtgcagccagggaagcg
ttacagggcttcaagatcacacagactaacgcaatgaagatctcgtttgccaagaaataa

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