Silurus meridionalis (southern catfish): 124397963
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Entry
124397963 CDS
T08004
Symbol
siah2l
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124397963 (siah2l)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124397963 (siah2l)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124397963 (siah2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Arabinose_bd
Motif
Other DBs
NCBI-GeneID:
124397963
NCBI-ProteinID:
XP_046723836
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All DBs
Position
15:complement(22375187..22395038)
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AA seq
331 aa
AA seq
DB search
MSRPSSAGGAAGGLGAGKAGGNKHGGSGGGGGGGSGVGAGVGVGATSATAAAGALSGSVA
GSVPAVATVALPHSALAGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCC
PTCRGPLTPSIRNLAMEKVASTLPFPCKYASAGCLLSLHHSEKPEHEEVCEFRPYTCPCP
GASCKWQGSLEAVMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFML
VLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAI
MNSDCLVFDTSIAHLFADNGNLGINVTISMC
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtccgtcctccgcgggtggtgcggccggaggactcggagcaggcaaagcggga
ggaaacaagcacggaggctcgggaggcggtggcggtggaggtagtggagttggagcagga
gtaggagtaggagccaccagcgctacagcagcggcaggcgccctgtcgggctcagtggct
ggctcggtccccgcggtggcaaccgtggccctgccgcactccgccctggccggacagtcc
gcggagctcaccgcgctgttcgagtgtcccgtgtgtttcgactacgtgctgccgccgatc
ctgcagtgtcaggccggacacctggtctgcaaccagtgccggcagaagcttagctgctgc
ccgacatgccgcggcccgctcaccccgagcatccggaacctggccatggagaaggtcgcg
tccacgctgccgtttccttgtaagtatgcatcggcaggttgcctgctgtcgctgcaccac
agcgagaagccagagcacgaggaggtgtgcgagttccgcccctacacctgcccctgccca
ggtgcgtcttgcaaatggcaaggttccctggaggcagtcatgcctcacctcatgcacgcc
cacaaatccatcaccacgcttcaaggcgaggacatcgtcttcctggcgacagacatcaac
ctgcctggcgccgtggactgggtcatgatgcagtcctgcttcggacaccatttcatgctg
gtgctggagaagcaggagaagtacgagggccaccagcagttcttcgccatcgtgctcctt
attggcactcgcaaacaagccgaaaacttcgcctaccgtctcgagctgaacggcaaccgc
agacggcttacgtgggaagccacgccacggtccattcacgacggtgtagcagcggcaatc
atgaacagcgactgcctcgtcttcgacacctccatcgcccacctgtttgctgacaacgga
aacctgggcatcaacgtcaccatctccatgtgctga
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integrated database retrieval system
