Silurus meridionalis (southern catfish): 124398795
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Entry
124398795 CDS
T08004
Symbol
plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00310
Lysine degradation
smeo00514
Other types of O-glycan biosynthesis
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124398795 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124398795 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124398795 (plod3)
Enzymes [BR:
smeo01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
124398795 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
124398795 (plod3)
2.4.1.66 procollagen glucosyltransferase
124398795 (plod3)
Glycosyltransferases [BR:
smeo01003
]
O-Glycan biosynthesis
O-linked Gal type
124398795 (plod3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
Motif
Other DBs
NCBI-GeneID:
124398795
NCBI-ProteinID:
XP_046725121
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Position
16:complement(17258929..17265754)
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AA seq
730 aa
AA seq
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MEVRFLLVFIFLLQLSVTEGARAKPDDLLVITAATEETDGFKRFMRTAKEFNYTVKVLGL
GEEWRGGDVAKTVGGGQKVRWLKKEMQKYKDKQDMVILFVDSYDVILASGPSELLMKFSR
INHRVVFSAEGFCWPDQRLAPKYPEVHSGKRYLNSGGFIGYAPEIYAIVNQWKHRDNDDD
QLYYTRIYLNKEQRVKFNITLDHKSQIFQNLNGAIEEVVLKFEKSRVRARNVAYDTLPVV
IHGNGPTKLQLNYLGNYVPTAWTYERGCGVCDDELLYFSDVLDEEMPQVLVAVFIEHPTP
FIEEFLERLATLNYPHTRLRLFIHNNVVYHEQHVQWFWNKHRSLFPNARLVGPEENLKHD
QARTMAVEMCKNDPTLDYYFSIDSDVALINPDILRILIEENKPVIAPMLSRHGKLWSNFW
GALSPEGFYSRSEDYIEIVQGKRVGVWNVPYITQVYLIRGDVLRTRLSHVSLYQEDGLDP
DMVFCRAVRDQGVFMFVSNRDEFGRLIATNNYNISRLHPDMWQIFDNPIDWREKYVHKNY
SQIFENGVDLVEQPCPDVYWFPAFSEKMCDDLVETMEHFGHWSGGKHTDERLSGGYENVP
TVDIHMNQIQFEKEWLRFLKDYIAPVTEKLYPGYYAKAKAVMNFVVRYHPDEQPALRPHH
DSSTFTINIALNSKGKDYEGGGCRFLRYDCRIEAPRKGWSLMHPGRLTHYHEGLPTTKGT
RYIMVSFVDP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaggttcgcttcctcctggtgtttattttcctgctgcagctctcagtgacggaagga
gctcgagctaaaccagatgatctgttggtgattactgctgcaactgaagaaacagacggc
ttcaaaagattcatgagaacagcaaaagaattcaactacactgtgaaggtgctgggtctg
ggtgaagaatggagaggaggtgatgttgctaaaacggttggaggaggacagaaggttcgc
tggctgaagaaggaaatgcaaaaatacaaagataaacaggacatggtcatcctcttcgta
gacagttatgatgtcattcttgcctctggtcctagtgagctgctcatgaagttctctcgc
attaaccatcgtgttgttttttctgctgagggattctgctggcctgatcaacgtctcgct
cccaaatatcctgaagttcatagcggcaaacgctaccttaactctggaggtttcattggt
tatgctccagaaatctatgctatagttaatcagtggaagcacagagataatgatgatgac
cagctctactacacacgcatctacctgaacaaggaacaaagggtgaagtttaacatcaca
ctggatcataaatcacagatttttcaaaatcttaatggtgccattgaggaagttgttctg
aagtttgagaaatctcgagttagagctcgaaatgttgcttatgacacccttcctgttgtt
atccatggcaatggcccaactaagctccagttaaattatctgggtaattatgtgccgaca
gcgtggacttatgagcgcggctgtggtgtgtgtgatgacgagcttctgtacttcagtgat
gtgctggatgaagagatgccgcaggttcttgtggcggtgtttatcgaacacccaacaccc
tttattgaggaatttctcgagcgactggcaaccctgaactacccacacactcgcttacgc
ctgttcatacacaacaacgtggtgtatcatgagcagcatgtgcagtggttctggaataaa
catcgctctctattccctaatgcccgacttgttggacctgaagagaatctaaaacacgat
caggccagaaccatggcagtggagatgtgtaagaatgatccaacccttgattactacttc
agcattgacagtgatgtggctttaatcaaccctgacattctgcgcatcctcatcgaagag
aacaagcctgtaattgcccccatgttgtcccgtcatggtaaactctggtctaatttttgg
ggagctctgagtcctgaaggattttattctcgttctgaagattacatcgagattgtacag
gggaaaagagttggagtgtggaacgttccatatataacacaggtgtatttgatacgtggt
gatgtacttcgtactcgtctttcccacgtgtccctttaccaggaggatggtttggaccca
gacatggtgttctgcagagcagttcgggaccagggtgtgtttatgtttgtatccaatagg
gatgagtttggccggttgatcgccaccaacaactacaacatcagcagactgcatccagac
atgtggcaaatatttgacaaccccattgactggagagagaaatatgtccataagaattac
tctcagatctttgagaatggtgtggatctggtggaacagccgtgtccagatgtttactgg
tttcctgccttttcagaaaagatgtgtgatgatctcgtcgagactatggagcacttcggc
cactggtccggggggaaacatacggacgaacgtttatcaggtggatatgaaaacgttccc
actgtcgatattcacatgaatcagattcagtttgagaaagagtggctcagattcctgaaa
gattacattgctcctgtaactgaaaaactttatccaggatattatgcaaaggctaaagct
gtgatgaactttgtggttcgttatcatcctgatgaacaacctgcactccgcccacatcac
gactcatcaacattcacaatcaacattgctctgaacagcaaggggaaagactatgaggga
gggggatgcaggttcttgcgttatgattgcagaattgaagctccaagaaaaggctggtct
ttaatgcacccaggacgtttaacacactaccatgagggtcttcctacaaccaagggcact
cgatacatcatggtctcatttgtagacccctaa
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